RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 CRHR2Q13324 411 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 PGM5Q15124 567 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 CALCRLQ16602 461 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 PLEKHH3Q7Z736 793 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 SLFN12Q8IYM2 578 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 ZIC5Q96T25 663 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 SLC5A4Q9NY91 659 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 PCDHA7Q9UN72 937 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
SHOX2-206ENST00000554685 VEGFBP49765 207 aa16.27■□□□□ 0.2
SHOX2-206ENST00000554685 TMEM266Q2M3C6 531 aa16.27■□□□□ 0.2
SHOX2-206ENST00000554685 CEP55Q53EZ4 464 aa16.27■□□□□ 0.2
SHOX2-206ENST00000554685 DTHD1Q6ZMT9 781 aa16.27■□□□□ 0.2
SHOX2-206ENST00000554685 C4orf32Q8N8J7 132 aa16.27■□□□□ 0.2
SHOX2-206ENST00000554685 FAM133AQ8N9E0 248 aa16.27■□□□□ 0.2
SHOX2-206ENST00000554685 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
SHOX2-206ENST00000554685 FAM20AQ96MK3 541 aa16.27■□□□□ 0.2
SHOX2-206ENST00000554685 CFHR5Q9BXR6 569 aa16.27■□□□□ 0.2
SHOX2-206ENST00000554685 RAB34Q9BZG1 259 aa16.27■□□□□ 0.2
SHOX2-206ENST00000554685 FBXO2Q9UK22 296 aaPredicted RBP16.27■□□□□ 0.2
SHOX2-206ENST00000554685 SMCHD1A6NHR9 2005 aa16.26■□□□□ 0.19
SHOX2-206ENST00000554685 DNAJC25-GNG10A0A024R161 153 aa16.26■□□□□ 0.19
SHOX2-206ENST00000554685 SLC15A5A6NIM6 579 aa16.26■□□□□ 0.19
SHOX2-206ENST00000554685 EDIL3O43854 480 aa16.26■□□□□ 0.19
SHOX2-206ENST00000554685 NR3C2P08235 984 aa16.26■□□□□ 0.19
SHOX2-206ENST00000554685 LONP1P36776 959 aaKnown RBP16.26■□□□□ 0.19
SHOX2-206ENST00000554685 ALDH5A1P51649 535 aaPredicted RBP16.26■□□□□ 0.19
SHOX2-206ENST00000554685 UBXN2AP68543 259 aa16.26■□□□□ 0.19
SHOX2-206ENST00000554685 PRR16Q569H4 304 aa16.26■□□□□ 0.19
SHOX2-206ENST00000554685 GPR142Q7Z601 462 aa16.26■□□□□ 0.19
SHOX2-206ENST00000554685 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
SHOX2-206ENST00000554685 MXRA8Q9BRK3 442 aa16.26■□□□□ 0.19
SHOX2-206ENST00000554685 MAFGO15525 162 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 SLC37A4O43826 429 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 MYCLP12524 364 aaPredicted RBP16.25■□□□□ 0.19
SHOX2-206ENST00000554685 CMA1P23946 247 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 ADORA2AP29274 412 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 GRB14Q14449 540 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 STXBP2Q15833 593 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 GNPTABQ3T906 1256 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 CCDC73Q6ZRK6 1079 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 VSIG10LQ86VR7 867 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 PLA2G4DQ86XP0 818 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 MRPS27Q92552 414 aaKnown RBP16.25■□□□□ 0.19
SHOX2-206ENST00000554685 CDHR1Q96JP9 859 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 AK8Q96MA6 479 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 MTMR9Q96QG7 549 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 TMEM60Q9H2L4 133 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 JADE2Q9NQC1 790 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 FAM13BQ9NYF5 915 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 DIS3Q9Y2L1 958 aaKnown RBP16.25■□□□□ 0.19
SHOX2-206ENST00000554685 UBIAD1Q9Y5Z9 338 aa16.25■□□□□ 0.19
SHOX2-206ENST00000554685 DDX49Q9Y6V7 483 aaKnown RBP16.25■□□□□ 0.19
SHOX2-206ENST00000554685 THSD7BQ9C0I4 1608 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 TCHHQ07283 1943 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 IGLV3-22A0A075B6J6 115 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 VWA3AA6NCI4 1184 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 ASB14A6NK59 587 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 FAM86B1E9PN63 330 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 MEIS1O00470 390 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 EIF3JO75822 258 aaKnown RBP16.24■□□□□ 0.19
SHOX2-206ENST00000554685 FAM86B2P0C5J1 330 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 HSPA6P17066 643 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 TXLNAP40222 546 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 CNTN2Q02246 1040 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 PDE4DQ08499 809 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 AXDND1Q5T1B0 1012 aaPredicted RBP16.24■□□□□ 0.19
SHOX2-206ENST00000554685 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
SHOX2-206ENST00000554685 IL31RAQ8NI17 732 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 SOCS4Q8WXH5 440 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 GPRASP2Q96D09 838 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 KCNMB3Q9NPA1 279 aa16.24■□□□□ 0.19
SHOX2-206ENST00000554685 MYH7BA7E2Y1 1941 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 SOWAHBA6NEL2 793 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 GADD45BO75293 160 aaPredicted RBP16.23■□□□□ 0.19
SHOX2-206ENST00000554685 EDNRBP24530 442 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 FXR2P51116 673 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHOX2-206ENST00000554685 FCGRTP55899 365 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 MRPS9P82933 396 aaKnown RBP16.23■□□□□ 0.19
SHOX2-206ENST00000554685 MTMR1Q13613 665 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 KIF22Q14807 665 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 KLHL40Q2TBA0 621 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 DPP9Q86TI2 863 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 FSIP1Q8NA03 581 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 ETNPPLQ8TBG4 499 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 LENG9Q96B70 501 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 PURBQ96QR8 312 aaKnown RBP16.23■□□□□ 0.19
SHOX2-206ENST00000554685 PYM1Q9BRP8 204 aaKnown RBP16.23■□□□□ 0.19
SHOX2-206ENST00000554685 PCDHA12Q9UN75 941 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 STK24Q9Y6E0 443 aa16.23■□□□□ 0.19
SHOX2-206ENST00000554685 ZNF236Q9UL36 1845 aa16.22■□□□□ 0.19
SHOX2-206ENST00000554685 TNPO2O14787 897 aaKnown RBP16.22■□□□□ 0.19
SHOX2-206ENST00000554685 MSH4O15457 936 aa16.22■□□□□ 0.19
SHOX2-206ENST00000554685 PGK2P07205 417 aa16.22■□□□□ 0.19
SHOX2-206ENST00000554685 ITGB5P18084 799 aa16.22■□□□□ 0.19
SHOX2-206ENST00000554685 TXKP42681 527 aa16.22■□□□□ 0.19
SHOX2-206ENST00000554685 PDIA5Q14554 519 aa16.22■□□□□ 0.19
SHOX2-206ENST00000554685 ZNF792Q3KQV3 632 aa16.22■□□□□ 0.19
SHOX2-206ENST00000554685 RESP18Q5W5W9 173 aa16.22■□□□□ 0.19
SHOX2-206ENST00000554685 MSL3Q8N5Y2 521 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms