RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 GPKOWQ92917 476 aaPredicted RBP eCLIP12.29□□□□□ -0.44
SHMT2-213ENST00000554600 PDCD2LQ9BRP1 358 aa12.29□□□□□ -0.44
SHMT2-213ENST00000554600 POLR3EQ9NVU0 708 aa12.29□□□□□ -0.44
SHMT2-213ENST00000554600 MRVI1Q9Y6F6 885 aa12.29□□□□□ -0.44
SHMT2-213ENST00000554600 SORBS3O60504 671 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 EIF3JO75822 258 aaKnown RBP12.28□□□□□ -0.44
SHMT2-213ENST00000554600 ARIH2O95376 493 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 GH1P01241 217 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 METAP2P50579 478 aaKnown RBP eCLIP12.28□□□□□ -0.441e-6■■■□□ 18.9
SHMT2-213ENST00000554600 PSMC6P62333 389 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 NKX3-2P78367 333 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 GHRHRQ02643 423 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 ITGA7Q13683 1181 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 PGM5Q15124 567 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 LY6KQ17RY6 165 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 IL31RAQ8NI17 732 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 BADQ92934 168 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 USP26Q9BXU7 913 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 PSTPIP2Q9H939 334 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 CYP46A1Q9Y6A2 500 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 CNTNAP5Q8WYK1 1306 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 SCN5AQ14524 2016 aa12.28□□□□□ -0.44
SHMT2-213ENST00000554600 CCDC196A0A1B0GTZ2 297 aa12.27□□□□□ -0.45
SHMT2-213ENST00000554600 TRIM43BA6NCK2 446 aa12.27□□□□□ -0.45
SHMT2-213ENST00000554600 EPB41L2O43491 1005 aaKnown RBP12.27□□□□□ -0.45
SHMT2-213ENST00000554600 BMP8BP34820 402 aa12.27□□□□□ -0.45
SHMT2-213ENST00000554600 NAPAP54920 295 aa12.27□□□□□ -0.45
SHMT2-213ENST00000554600 FAM47CQ5HY64 1035 aa12.27□□□□□ -0.45
SHMT2-213ENST00000554600 CCDC62Q6P9F0 684 aa12.27□□□□□ -0.45
SHMT2-213ENST00000554600 ANKRD33Q7Z3H0 272 aa12.27□□□□□ -0.45
SHMT2-213ENST00000554600 TRIM43Q96BQ3 446 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-213ENST00000554600 TOX2Q96NM4 488 aa12.27□□□□□ -0.45
SHMT2-213ENST00000554600 MTG1Q9BT17 334 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-213ENST00000554600 PRO3102Q9H379 93 aa12.27□□□□□ -0.45
SHMT2-213ENST00000554600 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-213ENST00000554600 MYH9P35579 1960 aaKnown RBP12.27□□□□□ -0.45
SHMT2-213ENST00000554600 A0A1W2PPC1 479 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 CDC27P30260 824 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 ADD1P35611 737 aaKnown RBP12.26□□□□□ -0.45
SHMT2-213ENST00000554600 RCAN1P53805 252 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 PURAQ00577 322 aaKnown RBP12.26□□□□□ -0.45
SHMT2-213ENST00000554600 FAAP100Q0VG06 881 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 UBE2SQ16763 222 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 WWC2Q6AWC2 1192 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 KCNV1Q6PIU1 500 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 RUFY3Q7L099 469 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 VSIG10LQ86VR7 867 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 DHX37Q8IY37 1157 aaKnown RBP12.26□□□□□ -0.45
SHMT2-213ENST00000554600 TDHQ8IZJ6 230 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 AFG1LQ8WV93 481 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 UPF3BQ9BZI7 483 aaKnown RBP12.26□□□□□ -0.45
SHMT2-213ENST00000554600 PPP1R12CQ9BZL4 782 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 RTEL1Q9NZ71 1219 aa12.26□□□□□ -0.45
SHMT2-213ENST00000554600 DDX41Q9UJV9 622 aaKnown RBP12.26□□□□□ -0.45
SHMT2-213ENST00000554600 WDR81Q562E7 1941 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 A6NJR5 290 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 SPDYE3A6NKU9 549 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 MEIS2O14770 477 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 KIAA0355O15063 1070 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 KPNA6O60684 536 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 MMP3P08254 477 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 CDK7P50613 346 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 AKAP17AQ02040 695 aaKnown RBP12.25□□□□□ -0.45
SHMT2-213ENST00000554600 ARHGAP1Q07960 439 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 GNPTABQ3T906 1256 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 FAM126BQ8IXS8 530 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 PPP1R13LQ8WUF5 828 aa12.25□□□□□ -0.45
SHMT2-213ENST00000554600 PIK3CDO00329 1044 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 GRIN2DO15399 1336 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 PPFIA3O75145 1194 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 RGS20O76081 388 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 GGPS1O95749 300 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 ADCY7P51828 1080 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 CCT2P78371 535 aaKnown RBP12.24□□□□□ -0.45
SHMT2-213ENST00000554600 FPGSQ05932 587 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 FUT2Q10981 343 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 LAMC2Q13753 1193 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 NBPF20Q3BBV1 942 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 GBF1Q92538 1859 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 SPATA33Q96N06 139 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 LARP6Q9BRS8 491 aaKnown RBP12.24□□□□□ -0.45
SHMT2-213ENST00000554600 SEZ6LQ9BYH1 1024 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 TRPV6Q9H1D0 765 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 EHMT1Q9H9B1 1298 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 MLXIPQ9HAP2 919 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 ZSWIM6Q9HCJ5 1215 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 FAM217BQ9NTX9 383 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-213ENST00000554600 PDRG1Q9NUG6 133 aa12.24□□□□□ -0.45
SHMT2-213ENST00000554600 TANC1Q9C0D5 1861 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 FRMPD4Q14CM0 1322 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 hCG_1984214I3L0E3 225 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
SHMT2-213ENST00000554600 STAM2O75886 525 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 TIMP1P01033 207 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 UBA1P22314 1058 aaKnown RBP12.23□□□□□ -0.45
SHMT2-213ENST00000554600 ITGB8P26012 769 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 MRPS9P82933 396 aaKnown RBP12.23□□□□□ -0.45
SHMT2-213ENST00000554600 STK3Q13188 491 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 DGKDQ16760 1214 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 PCNX4Q63HM2 1172 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms