RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 EMID1Q96A84 441 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-213ENST00000554508 MYL10Q9BUA6 226 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 DDX41Q9UJV9 622 aaKnown RBP10.08□□□□□ -0.8
ACTN1-213ENST00000554508 B4GALT4O60513 344 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 STAM2O75886 525 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
ACTN1-213ENST00000554508 PSMC6P62333 389 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 ARHGAP1Q07960 439 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 LAMC2Q13753 1193 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 LY6KQ17RY6 165 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 NFRKBQ6P4R8 1299 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 FCHSD1Q86WN1 690 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 RASEFQ8IZ41 740 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 PIBF1Q8WXW3 757 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 KCNB2Q92953 911 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 CUL5Q93034 780 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 LRRC2Q9BYS8 371 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 ALDH8A1Q9H2A2 487 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-213ENST00000554508 RBM28Q9NW13 759 aaKnown RBP10.07□□□□□ -0.8
ACTN1-213ENST00000554508 MRVI1Q9Y6F6 885 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 MYO9BQ13459 2157 aa10.07□□□□□ -0.8
ACTN1-213ENST00000554508 PIK3CDO00329 1044 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 EPB41L2O43491 1005 aaKnown RBP10.06□□□□□ -0.8
ACTN1-213ENST00000554508 RGS20O76081 388 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 REC8O95072 547 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 PLEKHA8P1O95397 391 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 MMP3P08254 477 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 RXRAP19793 462 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 RCAN1P53805 252 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 EPHB4P54760 987 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 SMAD3P84022 425 aaKnown RBP10.06□□□□□ -0.8
ACTN1-213ENST00000554508 COL9A3Q14050 684 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-213ENST00000554508 DGKDQ16760 1214 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 NBPF20Q3BBV1 942 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 XRRA1Q6P2D8 792 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 DHX37Q8IY37 1157 aaKnown RBP10.06□□□□□ -0.8
ACTN1-213ENST00000554508 DEFB123Q8N688 67 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 AFG1LQ8WV93 481 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 RNPC3Q96LT9 517 aaKnown RBP10.06□□□□□ -0.8
ACTN1-213ENST00000554508 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 TRPV6Q9H1D0 765 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 HIPK3Q9H422 1215 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 IL23AQ9NPF7 189 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 DOCK5Q9H7D0 1870 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 FRMPD4Q14CM0 1322 aa10.06□□□□□ -0.8
ACTN1-213ENST00000554508 ZBTB43O43298 467 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 PPFIA4O75335 1185 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 CSF2RAP15509 400 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 CYP2C18P33260 490 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 HSPA4P34932 840 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 ADCK5Q3MIX3 580 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 GNPTABQ3T906 1256 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 FAM47CQ5HY64 1035 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 TMEM240Q5SV17 173 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 CELF3Q5SZQ8 465 aaKnown RBP10.05□□□□□ -0.8
ACTN1-213ENST00000554508 MYSM1Q5VVJ2 828 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 PSRC1Q6PGN9 363 aaPredicted RBP10.05□□□□□ -0.8
ACTN1-213ENST00000554508 APOA5Q6Q788 366 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 TMTC3Q6ZXV5 915 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 MICU3Q86XE3 530 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 TEX2Q8IWB9 1127 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 RPUSD2Q8IZ73 545 aaKnown RBP10.05□□□□□ -0.8
ACTN1-213ENST00000554508 CMTR1Q8N1G2 835 aaKnown RBP10.05□□□□□ -0.8
ACTN1-213ENST00000554508 PPTC7Q8NI37 304 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 SMARCC2Q8TAQ2 1214 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.05□□□□□ -0.88e-7■■■□□ 15.4
ACTN1-213ENST00000554508 NOC4LQ9BVI4 516 aaKnown RBP10.05□□□□□ -0.8
ACTN1-213ENST00000554508 KATNAL1Q9BW62 490 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 PSTPIP2Q9H939 334 aa10.05□□□□□ -0.8
ACTN1-213ENST00000554508 SCN5AQ14524 2016 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-213ENST00000554508 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-213ENST00000554508 hCG_1984214I3L0E3 225 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 MEIS2O14770 477 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-213ENST00000554508 PSMA5P28066 241 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 ICAM3P32942 547 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 MRPS9P82933 396 aaKnown RBP10.04□□□□□ -0.8
ACTN1-213ENST00000554508 FGD1P98174 961 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 RTN1Q16799 776 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 PCNX4Q63HM2 1172 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 C16orf59Q7L2K0 433 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 SESTD1Q86VW0 696 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 RAB11FIP4Q86YS3 637 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 FBXL16Q8N461 479 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 CCDC82Q8N4S0 544 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 ZNF713Q8N859 430 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-213ENST00000554508 IL31RAQ8NI17 732 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 INPP4AQ96PE3 977 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-213ENST00000554508 MLXIPQ9HAP2 919 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 TRMT13Q9NUP7 481 aaKnown RBP10.04□□□□□ -0.8
ACTN1-213ENST00000554508 MTMR10Q9NXD2 777 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 BRPF3Q9ULD4 1205 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 SNX14Q9Y5W7 946 aa10.04□□□□□ -0.8
ACTN1-213ENST00000554508 TMEM265A0A087WTH1 108 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 KLF18A0A0U1RQI7 1052 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 CCDC196A0A1B0GTZ2 297 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 SPATA31C2B4DYI2 1134 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 PITPNM1O00562 1244 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms