RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 SLC43A3Q8NBI5 491 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 CTCFLQ8NI51 663 aaPredicted RBP12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 TBC1D5Q92609 795 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 FAM122AQ96E09 287 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 RMDN3Q96TC7 470 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 LZTS2Q9BRK4 669 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 SPZ1Q9BXG8 430 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 COL20A1Q9P218 1284 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 PCDHA1Q9Y5I3 950 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 MYH7BA7E2Y1 1941 aa12.07□□□□□ -0.48
PTCD2P1-201ENST00000554393 TLR3O15455 904 aaKnown RBP12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 CFBP00751 764 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 NEFLP07196 543 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 GNAQP50148 359 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 STXBP2Q15833 593 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 BRDTQ58F21 947 aaPredicted RBP12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 HOMER1Q86YM7 354 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 FAM126BQ8IXS8 530 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 BADQ92934 168 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 VTI1AQ96AJ9 217 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 TAAR1Q96RJ0 339 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 PIGSQ96S52 555 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 PXMP2Q9NR77 195 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 TMEM39AQ9NV64 488 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 TBX21Q9UL17 535 aa12.06□□□□□ -0.48
PTCD2P1-201ENST00000554393 CCDC69A6NI79 296 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 A6NJR5 290 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 KPNA6O60684 536 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 EIF3JO75822 258 aaKnown RBP12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 CD4P01730 458 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 TXNP10599 105 aaKnown RBP12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 RAG1P15918 1043 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 KRT32Q14532 448 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 TMEM63BQ5T3F8 832 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 ARHGEF16Q5VV41 709 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 CCDC62Q6P9F0 684 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 Q7L0L9 218 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 SGMS1Q86VZ5 419 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 SPRYD3Q8NCJ5 442 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 OR6J1Q8NGC5 347 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 METRNQ9UJH8 293 aa12.05□□□□□ -0.48
PTCD2P1-201ENST00000554393 GCOM1H8Y6P7 765 aaPredicted RBP12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 GTPBP6O43824 516 aaPredicted RBP12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 TIMP1P01033 207 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 NR3C2P08235 984 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 POLR2MP0CAP2 368 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 EIF2AK2P19525 551 aaKnown RBP12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 PTGS1P23219 599 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 ITGB8P26012 769 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 PURAQ00577 322 aaKnown RBP12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 ITGA7Q13683 1181 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 NFXL1Q6ZNB6 911 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 RRP36Q96EU6 259 aaKnown RBP12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 NEK1Q96PY6 1258 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 PDCD2LQ9BRP1 358 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 RAPGEFL1Q9UHV5 662 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 GRIN2DO15399 1336 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 FRMPD4Q14CM0 1322 aa12.04□□□□□ -0.48
PTCD2P1-201ENST00000554393 ARIH2O95376 493 aa12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 GH1P01241 217 aa12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 HMGB1P09429 215 aaKnown RBP12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 FPGSQ05932 587 aa12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 COL9A3Q14050 684 aaPredicted RBP12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 MFSD5Q6N075 450 aa12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 KCNV1Q6PIU1 500 aa12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 DHX32Q7L7V1 743 aaKnown RBP12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 KCNB2Q92953 911 aa12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 EMID1Q96A84 441 aaPredicted RBP12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 MTG1Q9BT17 334 aaPredicted RBP12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 MYL10Q9BUA6 226 aa12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 MTMR10Q9NXD2 777 aa12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 SEC63Q9UGP8 760 aaKnown RBP12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 TANC1Q9C0D5 1861 aa12.03□□□□□ -0.48
PTCD2P1-201ENST00000554393 PRUNE2Q8WUY3 3088 aa12.02□□□□□ -0.48
PTCD2P1-201ENST00000554393 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 EPB41L2O43491 1005 aaKnown RBP12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 HOXA13P31271 388 aaPredicted RBP12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 RCAN1P53805 252 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 EXOSC10Q01780 885 aaKnown RBP12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 ARHGAP1Q07960 439 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 PGM5Q15124 567 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 SHHQ15465 462 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 APOA5Q6Q788 366 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 SYNE3Q6ZMZ3 975 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 SEPT14Q6ZU15 432 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 VSIG10LQ86VR7 867 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 SRBD1Q8N5C6 995 aaKnown RBP12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 FANCBQ8NB91 859 aa12.02□□□□□ -0.49
PTCD2P1-201ENST00000554393 STAM2O75886 525 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 REC8O95072 547 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 PLEKHA8P1O95397 391 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 SEC24BO95487 1268 aa12.01□□□□□ -0.49
PTCD2P1-201ENST00000554393 MMP3P08254 477 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms