RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ADGRB3O60242 1522 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 ASMTLO95671 621 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 FGFR1P11362 822 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 IFNGR1P15260 489 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 VAV1P15498 845 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 KCNA6P17658 529 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 BMP8BP34820 402 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 CD96P40200 585 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 EGR3Q06889 387 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 SCRN1Q12765 414 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 BNIP3Q12983 259 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 GAB4Q2WGN9 574 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 EGFLAMQ63HQ2 1017 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 C16orf86Q6ZW13 317 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 TMPRSS7Q7RTY8 843 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 SCUBE1Q8IWY4 988 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 ASB11Q8WXH4 323 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 FCRL3Q96P31 734 aaPredicted RBP6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 DHRS4Q9BTZ2 278 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 SLC12A9Q9BXP2 914 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 CYP26B1Q9NR63 512 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 ANKRD50Q9ULJ7 1429 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 MRPS23Q9Y3D9 190 aaKnown RBP6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 ROBO1Q9Y6N7 1651 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 TMEM94Q12767 1356 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 SBNO2Q9Y2G9 1366 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 SRCAPQ6ZRS2 3230 aa6.8□□□□□ -1.32
MTHFD1-206ENST00000554353 RPRD2Q5VT52 1461 aaKnown RBP6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 PPP1R12AO14974 1030 aaPredicted RBP6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 COBLO75128 1261 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 HOXC12P31275 282 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 GFRA1P56159 465 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 PRKCQQ04759 706 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 IKZF1Q13422 519 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 C21orf62-AS1Q17RA5 79 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 MSMPQ1L6U9 139 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 PRSS53Q2L4Q9 553 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 INTS5Q6P9B9 1019 aaKnown RBP6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 RNF111Q6ZNA4 994 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 LINC00116Q8NCU8 138 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 ZNF526Q8TF50 670 aaPredicted RBP6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 KCTD13Q8WZ19 329 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 OSBP2Q969R2 916 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 CDADC1Q9BWV3 514 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 KRTAP4-9Q9BYQ8 210 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 BSDC1Q9NW68 430 aaPredicted RBP6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 VAV3Q9UKW4 847 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 BACE2Q9Y5Z0 518 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 TMEM131LA2VDJ0 1609 aa6.79□□□□□ -1.32
MTHFD1-206ENST00000554353 E9PCH4 1651 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 FAM135BQ49AJ0 1406 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 BLACEA4D250 179 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 C2orf71A6NGG8 1288 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 AURKAO14965 403 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 DLX3O60479 287 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 ZNF205O95201 554 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 ESR1P03372 595 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 CAPNS1P04632 268 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 RPL10P27635 214 aaKnown RBP6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 SSTR4P31391 388 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 SEPHS1P49903 392 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 SUMO1P63165 101 aaKnown RBP6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 TCEA2Q15560 299 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 TKFCQ3LXA3 575 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 PLEKHG4Q58EX7 1191 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 TMEM145Q8NBT3 493 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 MISP3Q96FF7 219 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 GPATCH3Q96I76 525 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 CCDC140Q96MF4 163 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 KRTAP4-2Q9BYR5 136 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 SLKQ9H2G2 1235 aaPredicted RBP6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 GPRC5CQ9NQ84 441 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 AP5S1Q9NUS5 200 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 UNC13BO14795 1591 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 NWD1Q149M9 1564 aa6.78□□□□□ -1.32
MTHFD1-206ENST00000554353 PHLPP1O60346 1717 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 CCDC163A0A0D9SF12 145 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 CCER2I3L3R5 266 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 MARCH6O60337 910 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 CPP00450 1065 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 HSPA5P11021 654 aaKnown RBP6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 ZPBP2Q6X784 338 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 WAPLQ7Z5K2 1190 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 KSR1Q8IVT5 923 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 KISS1RQ969F8 398 aaPredicted RBP6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 RGS17Q9UGC6 210 aaPredicted RBP6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 RNF112Q9ULX5 631 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 SLC5A6Q9Y289 635 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 CD2APQ9Y5K6 639 aa6.77□□□□□ -1.33
MTHFD1-206ENST00000554353 ZFYVE9O95405 1425 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 RIMS2Q9UQ26 1411 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 RAB11FIP3O75154 756 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 MED26O95402 600 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 THBDP07204 575 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 TEKQ02763 1124 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 MAP4K2Q12851 820 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 CBX2Q14781 532 aaPredicted RBP6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 NBPF8Q3BBV2 869 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 RTP2Q5QGT7 225 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 USP53Q70EK8 1073 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms