RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 NSUN4Q96CB9 384 aaKnown RBP8.45□□□□□ -1.06
ATXN3-224ENST00000554040 HSH2DQ96JZ2 352 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 C12orf42Q96LP6 360 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 TOX2Q96NM4 488 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.45□□□□□ -1.06
ATXN3-224ENST00000554040 BTBD7Q9P203 1132 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 STARD13Q9Y3M8 1113 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 LOC285556D6RIA3 1793 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 MAST2Q6P0Q8 1798 aa8.45□□□□□ -1.06
ATXN3-224ENST00000554040 SFI1A8K8P3 1242 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 ADARB2-AS1A8MUL3 147 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 STRNO43815 780 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
ATXN3-224ENST00000554040 TIMP1P01033 207 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 ITGB7P26010 798 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 ADORA2AP29274 412 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 IL15P40933 162 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-224ENST00000554040 TIMM10P62072 90 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 FAAP100Q0VG06 881 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 AAK1Q2M2I8 961 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 FAM47AQ5JRC9 791 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 TMEM240Q5SV17 173 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 PRAMEF19Q5SWL8 479 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 XP32Q5T750 250 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 RASIP1Q5U651 963 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 C16orf59Q7L2K0 433 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 SLC44A5Q8NCS7 719 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 PLVAPQ9BX97 442 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 SIL1Q9H173 461 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 DNAJC18Q9H819 358 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 ZBTB21Q9ULJ3 1066 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 DOCK2Q92608 1830 aa8.44□□□□□ -1.06
ATXN3-224ENST00000554040 RLFQ13129 1914 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 CHD9Q3L8U1 2897 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 PALM3A6NDB9 673 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-224ENST00000554040 COBLO75128 1261 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 USP14P54578 494 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 PPIGQ13427 754 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATXN3-224ENST00000554040 MFSD5Q6N075 450 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 CCDC174Q6PII3 467 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 ANKRD33Q7Z3H0 272 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 RNF180Q86T96 592 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 SH3RF3Q8TEJ3 882 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-224ENST00000554040 TNFRSF25Q93038 417 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 PHACTR1Q9C0D0 580 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 XPNPEP3Q9NQH7 507 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 SLC5A4Q9NY91 659 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 MSRAQ9UJ68 235 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 CHD7Q9P2D1 2997 aa8.43□□□□□ -1.06
ATXN3-224ENST00000554040 MYH2Q9UKX2 1941 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 DCDC2CA8MYV0 355 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 ERC2O15083 957 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 GH2P01242 217 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 RARBP10826 455 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 TFF2Q03403 129 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 TYRO3Q06418 890 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 RAB30Q15771 203 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 ZYXQ15942 572 aaKnown RBP8.42□□□□□ -1.06
ATXN3-224ENST00000554040 CRACR2BQ8N4Y2 399 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-224ENST00000554040 TGFBRAP1Q8WUH2 860 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 HERVK_113Q902F9 699 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 CLUAP1Q96AJ1 413 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 SNX27Q96L92 541 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 MOV10L1Q9BXT6 1211 aaKnown RBP8.42□□□□□ -1.06
ATXN3-224ENST00000554040 RAI14Q9P0K7 980 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 NRBP1Q9UHY1 535 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 TBX21Q9UL17 535 aa8.42□□□□□ -1.06
ATXN3-224ENST00000554040 TCF20Q9UGU0 1960 aaKnown RBP8.41□□□□□ -1.06
ATXN3-224ENST00000554040 A0A1W2PQ45 241 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-224ENST00000554040 A0A1W2PQY0 241 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 BAG3O95817 575 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 PGK1P00558 417 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 VCAM1P19320 739 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 ERCC3P19447 782 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 KCNQ1P51787 676 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 SPEM2Q0P670 501 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 ZNF365Q70YC5 407 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 RAB44Q7Z6P3 723 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-224ENST00000554040 MAPKAPK5Q8IW41 473 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 ABRAQ8N0Z2 381 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 SHCBP1Q8NEM2 672 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 SUSD3Q96L08 255 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 FEZ1Q99689 392 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 SPATC1LQ9H0A9 340 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 KIAA1683Q9H0B3 1180 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 NKX2-4Q9H2Z4 354 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 SLC28A3Q9HAS3 691 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 C11orf16Q9NQ32 467 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 HOXC10Q9NYD6 342 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 HMG20BQ9P0W2 317 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 PALD1Q9ULE6 856 aa8.41□□□□□ -1.06
ATXN3-224ENST00000554040 PRRC2BQ5JSZ5 2229 aaKnown RBP8.4□□□□□ -1.06
ATXN3-224ENST00000554040 ALBP02768 609 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 ACRP10323 421 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 CSF2RAP15509 400 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 COG2Q14746 738 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 MVPQ14764 893 aaKnown RBP8.4□□□□□ -1.06
ATXN3-224ENST00000554040 TATDN1Q6P1N9 297 aa8.4□□□□□ -1.06
ATXN3-224ENST00000554040 PSRC1Q6PGN9 363 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms