RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CARD11Q9BXL7 1154 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 ZNF552Q9H707 407 aaPredicted RBP4.46□□□□□ -1.7
SLIRP-202ENST00000553981 WDR90Q96KV7 1748 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 KDRP35968 1356 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 RBM47A0AV96 593 aaKnown RBP4.45□□□□□ -1.7
SLIRP-202ENST00000553981 FAM221AA4D161 298 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 PSPNO60542 156 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 CILPO75339 1184 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 DPEP1P16444 411 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 AMPHP49418 695 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 GALK1P51570 392 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 TEKQ02763 1124 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 CHRNEQ04844 493 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 TAF1CQ15572 869 aaPredicted RBP4.45□□□□□ -1.7
SLIRP-202ENST00000553981 CCDC84Q86UT8 332 aaPredicted RBP4.45□□□□□ -1.7
SLIRP-202ENST00000553981 SPPL2CQ8IUH8 684 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 SHISA4Q96DD7 197 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 KREMEN1Q96MU8 473 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 GCM1Q9NP62 436 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 GPR160Q9UJ42 338 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 C4AP0C0L4 1744 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 COL5A3P25940 1745 aaPredicted RBP4.45□□□□□ -1.7
SLIRP-202ENST00000553981 SBF1O95248 1867 aa4.45□□□□□ -1.7
SLIRP-202ENST00000553981 ANKRD26Q9UPS8 1709 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 INSRP06213 1382 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 TEX51A0A1B0GUA7 166 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 CHURC1-FNTBB4DL54 471 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 F6X3S4 739 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 BPNT1O95861 308 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 CTSHP09668 335 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 GYS1P13807 737 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 PDE6BP35913 854 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 TNNI2P48788 182 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 ST13P50502 369 aaKnown RBP4.44□□□□□ -1.7
SLIRP-202ENST00000553981 DDR1Q08345 913 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 DUSP4Q13115 394 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 SNX17Q15036 470 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 EAPPQ56P03 285 aaPredicted RBP4.44□□□□□ -1.7
SLIRP-202ENST00000553981 HDGFL2Q7Z4V5 671 aaPredicted RBP4.44□□□□□ -1.7
SLIRP-202ENST00000553981 ANKS4BQ8N8V4 417 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 GATAD2BQ8WXI9 593 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 LINC01599Q8WXQ3 324 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 COG3Q96JB2 828 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 PUS7Q96PZ0 661 aaKnown RBP4.44□□□□□ -1.7
SLIRP-202ENST00000553981 SGPP1Q9BX95 441 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 PARD6AQ9NPB6 346 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 REV1Q9UBZ9 1251 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 SRP68Q9UHB9 627 aaKnown RBP4.44□□□□□ -1.7
SLIRP-202ENST00000553981 CNOT6Q9ULM6 557 aaKnown RBP4.44□□□□□ -1.7
SLIRP-202ENST00000553981 ZNF281Q9Y2X9 895 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 KCPQ6ZWJ8 1503 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 KDM6AO15550 1401 aaPredicted RBP4.44□□□□□ -1.7
SLIRP-202ENST00000553981 C10orf71Q711Q0 1435 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 KIF20BQ96Q89 1820 aa4.44□□□□□ -1.7
SLIRP-202ENST00000553981 TJP1Q07157 1748 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 RTL1A6NKG5 1358 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 NOTOA8MTQ0 251 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 EFEMP2O95967 443 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 F13A1P00488 732 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 PF4P02776 101 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 MMP10P09238 476 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 PHKG2P15735 406 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 BMP7P18075 431 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 CHRNA5P30532 468 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 DAB2P98082 770 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 LMNB2Q03252 620 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 CAMK2GQ13555 558 aaPredicted RBP4.43□□□□□ -1.7
SLIRP-202ENST00000553981 DIEXFQ68CQ4 756 aaKnown RBP4.43□□□□□ -1.7
SLIRP-202ENST00000553981 JMYQ8N9B5 988 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 VWCEQ96DN2 955 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 CCDC74BQ96LY2 380 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 G6PC3Q9BUM1 346 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 ASPNQ9BXN1 380 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 PARP2Q9UGN5 583 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 KLHL3Q9UH77 587 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 TIMELESSQ9UNS1 1208 aa4.43□□□□□ -1.7
SLIRP-202ENST00000553981 POLR3KQ9Y2Y1 108 aaPredicted RBP4.43□□□□□ -1.7
SLIRP-202ENST00000553981 TONSLQ96HA7 1378 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 ARFGEF1Q9Y6D6 1849 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 A0A0G2JLL6 359 aaPredicted RBP4.42□□□□□ -1.7
SLIRP-202ENST00000553981 ANKRD33BA6NCL7 494 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 DNAJA2O60884 412 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 TOMM70O94826 608 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 HTR3BO95264 441 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 PSMD2Q13200 908 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 EIF4A2Q14240 407 aaKnown RBP4.42□□□□□ -1.7
SLIRP-202ENST00000553981 CLEC16AQ2KHT3 1053 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 C9orf131Q5VYM1 1079 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 ERICH6Q7L0X2 663 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 NLRX1Q86UT6 975 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 SIRT2Q8IXJ6 389 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 RELTQ969Z4 430 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 RHOVQ96L33 236 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 KCNC2Q96PR1 638 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 ZCCHC4Q9H5U6 513 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 TERF2IPQ9NYB0 399 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 POLKQ9UBT6 870 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 KCTD3Q9Y597 815 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 PCDH11XQ9BZA7 1347 aa4.42□□□□□ -1.7
SLIRP-202ENST00000553981 PCDH11YQ9BZA8 1340 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms