RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TANGO6Q9C0B7 1094 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 DEF6Q9H4E7 631 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 TBC1D7Q9P0N9 293 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 DDX25Q9UHL0 483 aaKnown RBP16.19■□□□□ 0.18
ACTN1-211ENST00000553882 SERPINB13Q9UIV8 391 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 SIK3Q9Y2K2 1263 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 PDE2AO00408 941 aaPredicted RBP16.18■□□□□ 0.18
ACTN1-211ENST00000553882 BBOX1O75936 387 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 TTLL1O95922 423 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 ZNF543Q08ER8 600 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 RRAGAQ7L523 313 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 SECISBP2LQ93073 1101 aaKnown RBP16.18■□□□□ 0.18
ACTN1-211ENST00000553882 PSMB7Q99436 277 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 PLAGL2Q9UPG8 496 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 CAPN6Q9Y6Q1 641 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 PVALEFA0A1B0GWK0 134 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L10C9JJH3 530 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 VAV2P52735 878 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 USP14P54578 494 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 RAD51AP2Q09MP3 1159 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 GSPT2Q8IYD1 628 aaKnown RBP16.18■□□□□ 0.18
ACTN1-211ENST00000553882 CERS5Q8N5B7 392 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 MLXIPQ9HAP2 919 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 FAN1Q9Y2M0 1017 aa16.18■□□□□ 0.18
ACTN1-211ENST00000553882 A0A1W2PQJ5 194 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 LRRC53A6NM62 1247 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 EIF3JO75822 258 aaKnown RBP16.17■□□□□ 0.18
ACTN1-211ENST00000553882 SNHG28P0DPA3 235 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 EIF4A3P38919 411 aaKnown RBP16.17■□□□□ 0.18
ACTN1-211ENST00000553882 TNNT3P45378 269 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-211ENST00000553882 KIF11P52732 1056 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-211ENST00000553882 DDR1Q08345 913 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 MAN2A1Q16706 1144 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 FIGNQ5HY92 759 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 GUF1Q8N442 669 aaKnown RBP16.17■□□□□ 0.18
ACTN1-211ENST00000553882 HAS1Q92839 578 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 GBP3Q9H0R5 595 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 KANSL2Q9H9L4 492 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 PNMA6FA0A0J9YX94 578 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 AKR1B10O60218 316 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 ORC2Q13416 577 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-211ENST00000553882 DOK7Q18PE1 504 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 WDR93Q6P2C0 686 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 LRRC55Q6ZSA7 311 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 ANKRD13CQ8N6S4 541 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 FGFBP2Q9BYJ0 223 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 RIC8AQ9NPQ8 531 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 USP40Q9NVE5 1235 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 MYH10P35580 1976 aa16.17■□□□□ 0.18
ACTN1-211ENST00000553882 FAM196BA6NMK8 535 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 hCG_1984214I3L0E3 225 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 MOCS3O95396 460 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 C2orf54Q08AI8 447 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 PDIA5Q14554 519 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 COBLL1Q53SF7 1204 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 ZNF713Q8N859 430 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-211ENST00000553882 PCDHA13Q9Y5I0 950 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 PLIN4Q96Q06 1357 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L15C9J2P7 530 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L13C9JLJ4 530 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L11C9JVI0 530 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L18D6R9N7 530 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L22D6RA61 530 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L17D6RBQ6 530 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L19D6RCP7 530 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L20D6RJB6 530 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L24Q0WX57 530 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 SHROOM1Q2M3G4 852 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-211ENST00000553882 TAF3Q5VWG9 929 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 USP17L6PQ6QN14 398 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 ZNF662Q6ZS27 426 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 CUL5Q93034 780 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 TRERF1Q96PN7 1200 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 PCDHA12Q9UN75 941 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 LY75O60449 1722 aa16.16■□□□□ 0.18
ACTN1-211ENST00000553882 IGKV6D-41A0A0C4DH26 115 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 UBAP1LF5GYI3 381 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 CXCR5P32302 372 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 SHMT1P34896 483 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 MRPS25P82663 173 aaKnown RBP16.15■□□□□ 0.18
ACTN1-211ENST00000553882 LRRC63Q05C16 580 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 COASYQ13057 564 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 NELFCDQ8IXH7 590 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 TXLNBQ8N3L3 684 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
ACTN1-211ENST00000553882 PSTPIP2Q9H939 334 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 NLRC4Q9NPP4 1024 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 CALCOCO1Q9P1Z2 691 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 E9PMD0 336 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 TRAF5O00463 557 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 PPEF1O14829 653 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-211ENST00000553882 ADRA2BP18089 450 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 CDK17Q00537 523 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 NFIAQ12857 509 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 TMEM119Q4V9L6 283 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 HSP90B2PQ58FF3 399 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 CACNA2D4Q7Z3S7 1137 aa16.15■□□□□ 0.18
ACTN1-211ENST00000553882 CCDC84Q86UT8 332 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-211ENST00000553882 NPHP3-ACAD11A0A0J9YXS1 232 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms