RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 XYLT2Q9H1B5 865 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 BCAS3Q9H6U6 928 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 ADAMTS20P59510 1910 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 FFAR3O14843 346 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 PLA2G1BP04054 148 aaKnown RBP6.42□□□□□ -1.38
SCFD1-210ENST00000553693 CYP2C8P10632 490 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 CHRNA2Q15822 529 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 DDR2Q16832 855 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 VWA3BQ502W6 1294 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 LIPIQ6XZB0 460 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 ANKS3Q6ZW76 656 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 SAPCD2Q86UD0 394 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 TP53I13Q8NBR0 393 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-210ENST00000553693 SMARCC2Q8TAQ2 1214 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 TRMT2BQ96GJ1 504 aaKnown RBP6.42□□□□□ -1.38
SCFD1-210ENST00000553693 COA3Q9Y2R0 106 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-210ENST00000553693 SIT1Q9Y3P8 196 aa6.42□□□□□ -1.38
SCFD1-210ENST00000553693 SH3D21A4FU49 640 aa6.41□□□□□ -1.38
SCFD1-210ENST00000553693 E9PSI1 815 aa6.41□□□□□ -1.38
SCFD1-210ENST00000553693 FPR2P25090 351 aa6.41□□□□□ -1.38
SCFD1-210ENST00000553693 KCNC1P48547 511 aa6.41□□□□□ -1.38
SCFD1-210ENST00000553693 ETV3LQ6ZN32 361 aa6.41□□□□□ -1.38
SCFD1-210ENST00000553693 ZC3H18Q86VM9 953 aaKnown RBP6.41□□□□□ -1.38
SCFD1-210ENST00000553693 CCDC103Q8IW40 242 aa6.41□□□□□ -1.38
SCFD1-210ENST00000553693 KREMEN2Q8NCW0 462 aa6.41□□□□□ -1.38
SCFD1-210ENST00000553693 FEZF2Q8TBJ5 459 aa6.41□□□□□ -1.38
SCFD1-210ENST00000553693 TMEM169Q96HH4 297 aa6.41□□□□□ -1.38
SCFD1-210ENST00000553693 X6R8D5 127 aa6.41□□□□□ -1.38
SCFD1-210ENST00000553693 IQCA1LA6NCM1 817 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 OTOL1A6NHN0 477 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-210ENST00000553693 H7BY64 318 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 BCL6P41182 706 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 SLURP1P55000 103 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 MAP4K2Q12851 820 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 CEP68Q76N32 757 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 FRMD5Q7Z6J6 570 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 MIB1Q86YT6 1006 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 TMEM145Q8NBT3 493 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 CXorf38Q8TB03 319 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 KCTD13Q8WZ19 329 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 TEPSINQ96N21 525 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 IGSF5Q9NSI5 407 aa6.4□□□□□ -1.38
SCFD1-210ENST00000553693 PPP2R2AP63151 447 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 PRSS53Q2L4Q9 553 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 NLRP10Q86W26 655 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 CELF2-AS1Q8N7Q2 184 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 SYT8Q8NBV8 401 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 DDX11Q96FC9 970 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 SGSM3Q96HU1 749 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 YIPF4Q9BSR8 244 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 NGRNQ9NPE2 291 aaKnown RBP6.39□□□□□ -1.39
SCFD1-210ENST00000553693 ST7Q9NRC1 585 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 NTMQ9P121 344 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 TMEFF2Q9UIK5 374 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-210ENST00000553693 PALD1Q9ULE6 856 aa6.39□□□□□ -1.39
SCFD1-210ENST00000553693 SGSM2O43147 1006 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 KLF4O43474 513 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 SMARCA5O60264 1052 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-210ENST00000553693 C8BP07358 591 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 ZC3H6P61129 1189 aaKnown RBP6.38□□□□□ -1.39
SCFD1-210ENST00000553693 LSAMPQ13449 338 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 HSP90AA2PQ14568 343 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-210ENST00000553693 SF1Q15637 639 aaKnown RBP6.38□□□□□ -1.39
SCFD1-210ENST00000553693 SLC35F1Q5T1Q4 408 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 TTLL7Q6ZT98 887 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 MILR1Q7Z6M3 343 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 FAM126BQ8IXS8 530 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 ZDHHC14Q8IZN3 488 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 RCBTB1Q8NDN9 531 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 ZBTB8AQ96BR9 441 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 C1orf159Q96HA4 380 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 CHAMP1Q96JM3 812 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 TRIM55Q9BYV6 548 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 USP40Q9NVE5 1235 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 PCDHA2Q9Y5H9 948 aa6.38□□□□□ -1.39
SCFD1-210ENST00000553693 A0A1W2PQU0 124 aa6.37□□□□□ -1.39
SCFD1-210ENST00000553693 ADRB1P08588 477 aa6.37□□□□□ -1.39
SCFD1-210ENST00000553693 DLX2Q07687 328 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-210ENST00000553693 RAB33AQ14088 237 aa6.37□□□□□ -1.39
SCFD1-210ENST00000553693 CARFQ8N187 725 aa6.37□□□□□ -1.39
SCFD1-210ENST00000553693 ST13P5Q8NFI4 369 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-210ENST00000553693 ZNF526Q8TF50 670 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-210ENST00000553693 IER2Q9BTL4 223 aa6.37□□□□□ -1.39
SCFD1-210ENST00000553693 EPB41L1Q9H4G0 881 aa6.37□□□□□ -1.39
SCFD1-210ENST00000553693 CLDND1Q9NY35 253 aa6.37□□□□□ -1.39
SCFD1-210ENST00000553693 ZNF652Q9Y2D9 606 aa6.37□□□□□ -1.39
SCFD1-210ENST00000553693 NPFFR2Q9Y5X5 522 aa6.37□□□□□ -1.39
SCFD1-210ENST00000553693 A0A1B0GTL3 188 aa6.36□□□□□ -1.39
SCFD1-210ENST00000553693 HGSO14964 777 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-210ENST00000553693 STK10O94804 968 aaKnown RBP6.36□□□□□ -1.39
SCFD1-210ENST00000553693 CAPNS1P04632 268 aa6.36□□□□□ -1.39
SCFD1-210ENST00000553693 GJA9P57773 515 aa6.36□□□□□ -1.39
SCFD1-210ENST00000553693 CKAP2LQ8IYA6 745 aa6.36□□□□□ -1.39
SCFD1-210ENST00000553693 ADGRG2Q8IZP9 1017 aa6.36□□□□□ -1.39
SCFD1-210ENST00000553693 LINC00482Q8N8I6 264 aa6.36□□□□□ -1.39
SCFD1-210ENST00000553693 NOX5Q96PH1 765 aa6.36□□□□□ -1.39
SCFD1-210ENST00000553693 SPATA25Q9BR10 227 aa6.36□□□□□ -1.39
SCFD1-210ENST00000553693 AARSD1Q9BTE6 412 aaKnown RBP6.36□□□□□ -1.39
SCFD1-210ENST00000553693 FBXL7Q9UJT9 491 aa6.36□□□□□ -1.39
SCFD1-210ENST00000553693 ARNTLO00327 626 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms