RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
PRPF39-204ENST00000553605 TMEM192Q8IY95 271 aa16.38■□□□□ 0.21
PRPF39-204ENST00000553605 MPHOSPH6Q99547 160 aaKnown RBP16.38■□□□□ 0.21
PRPF39-204ENST00000553605 IRF2BPLQ9H1B7 796 aa16.38■□□□□ 0.21
PRPF39-204ENST00000553605 GTF2IRD1Q9UHL9 959 aa16.38■□□□□ 0.21
PRPF39-204ENST00000553605 ZFHX2Q9C0A1 2572 aaPredicted RBP16.37■□□□□ 0.21
PRPF39-204ENST00000553605 CALML3P27482 149 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 TFAP4Q01664 338 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 MBTPS1Q14703 1052 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 ZNF618Q5T7W0 954 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 TRAF7Q6Q0C0 670 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 FBXO11Q86XK2 927 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 FBXL6Q8N531 539 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 DBF4BQ8NFT6 615 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 AFG1LQ8WV93 481 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 KAT2BQ92831 832 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 ATOH1Q92858 354 aaPredicted RBP16.37■□□□□ 0.21
PRPF39-204ENST00000553605 YME1L1Q96TA2 773 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 PLIN4Q96Q06 1357 aa16.37■□□□□ 0.21
PRPF39-204ENST00000553605 ARIH2O95376 493 aa16.36■□□□□ 0.21
PRPF39-204ENST00000553605 MMP3P08254 477 aa16.36■□□□□ 0.21
PRPF39-204ENST00000553605 CASTP20810 708 aaKnown RBP16.36■□□□□ 0.21
PRPF39-204ENST00000553605 EDNRBP24530 442 aa16.36■□□□□ 0.21
PRPF39-204ENST00000553605 TDO2P48775 406 aa16.36■□□□□ 0.21
PRPF39-204ENST00000553605 PTK7Q13308 1070 aa16.36■□□□□ 0.21
PRPF39-204ENST00000553605 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
PRPF39-204ENST00000553605 SMAD4Q13485 552 aaKnown RBP16.36■□□□□ 0.21
PRPF39-204ENST00000553605 SLC30A10Q6XR72 485 aa16.36■□□□□ 0.21
PRPF39-204ENST00000553605 C7orf31Q8N865 590 aa16.36■□□□□ 0.21
PRPF39-204ENST00000553605 RANBP17Q9H2T7 1088 aaKnown RBP16.36■□□□□ 0.21
PRPF39-204ENST00000553605 ALG13Q9NP73 1137 aaKnown RBP16.36■□□□□ 0.21
PRPF39-204ENST00000553605 HDAC6Q9UBN7 1215 aa16.36■□□□□ 0.21
PRPF39-204ENST00000553605 ZXDAP98168 799 aa16.35■□□□□ 0.21
PRPF39-204ENST00000553605 HYAL1Q12794 435 aa16.35■□□□□ 0.21
PRPF39-204ENST00000553605 TRIM71Q2Q1W2 868 aaKnown RBP16.35■□□□□ 0.21
PRPF39-204ENST00000553605 RNF207Q6ZRF8 634 aa16.35■□□□□ 0.21
PRPF39-204ENST00000553605 EPB41L4AQ9HCS5 686 aaPredicted RBP16.35■□□□□ 0.21
PRPF39-204ENST00000553605 EMSYQ7Z589 1322 aa16.35■□□□□ 0.21
PRPF39-204ENST00000553605 B4DLN1 442 aa16.34■□□□□ 0.21
PRPF39-204ENST00000553605 UPP2O95045 317 aa16.34■□□□□ 0.21
PRPF39-204ENST00000553605 APPP05067 770 aa16.34■□□□□ 0.21
PRPF39-204ENST00000553605 RLBP1P12271 317 aa16.34■□□□□ 0.21
PRPF39-204ENST00000553605 MRPL12P52815 198 aaKnown RBP16.34■□□□□ 0.21
PRPF39-204ENST00000553605 CCDC62Q6P9F0 684 aa16.34■□□□□ 0.21
PRPF39-204ENST00000553605 DNERQ8NFT8 737 aa16.34■□□□□ 0.21
PRPF39-204ENST00000553605 WNT8BQ93098 351 aa16.34■□□□□ 0.21
PRPF39-204ENST00000553605 TOP1MTQ969P6 601 aa16.34■□□□□ 0.21
PRPF39-204ENST00000553605 STX8Q9UNK0 236 aa16.34■□□□□ 0.21
PRPF39-204ENST00000553605 MYH7P12883 1935 aa16.34■□□□□ 0.21
PRPF39-204ENST00000553605 GH1P01241 217 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 PSEN2P49810 448 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 RPS6P62753 249 aaKnown RBP16.33■□□□□ 0.2
PRPF39-204ENST00000553605 LY6KQ17RY6 165 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 PPP4R3BQ5MIZ7 849 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 RASGRP2Q7LDG7 609 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 CHST3Q7LGC8 479 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 ERMP1Q7Z2K6 904 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 CLEC4DQ8WXI8 215 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 OSBP2Q969R2 916 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 ALG1Q9BT22 464 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 IGFLR1Q9H665 355 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 CD207Q9UJ71 328 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 MTMR7Q9Y216 660 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 MICAL3Q7RTP6 2002 aa16.33■□□□□ 0.2
PRPF39-204ENST00000553605 TBX10O75333 385 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 GNAT2P19087 354 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 AVPR2P30518 371 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 SLC16A2P36021 539 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 VCPP55072 806 aaKnown RBP16.32■□□□□ 0.2
PRPF39-204ENST00000553605 ARHGAP1Q07960 439 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 DGKDQ16760 1214 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 PLEKHG4Q58EX7 1191 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 TTBK2Q6IQ55 1244 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 KATNAL1Q9BW62 490 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 LMAN2LQ9H0V9 348 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 SPTBN4Q9H254 2564 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 MYO15AQ9UKN7 3530 aa16.32■□□□□ 0.2
PRPF39-204ENST00000553605 MYO7AQ13402 2215 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 RSPH10B2B2RC85 870 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 PATL2C9JE40 543 aaKnown RBP16.31■□□□□ 0.2
PRPF39-204ENST00000553605 H0Y858 1186 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 GPAA1O43292 621 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 RAB11FIP3O75154 756 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 RB1P06400 928 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
PRPF39-204ENST00000553605 RSPH10BP0C881 870 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 GTF2F1P35269 517 aaKnown RBP eCLIP16.31■□□□□ 0.2
PRPF39-204ENST00000553605 ZNF200P98182 395 aaPredicted RBP16.31■□□□□ 0.2
PRPF39-204ENST00000553605 MFSD10Q14728 455 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 CCDC96Q2M329 555 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 APPBP2Q92624 585 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 TLR9Q9NR96 1032 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 KMT2EQ8IZD2 1858 aa16.31■□□□□ 0.2
PRPF39-204ENST00000553605 PTPRZ1P23471 2315 aaPredicted RBP16.3■□□□□ 0.2
PRPF39-204ENST00000553605 LOC730098B7Z3J9 87 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 PROB1E7EW31 1015 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 C5orf67F2Z3F1 127 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 GRM6O15303 877 aa16.3■□□□□ 0.2
PRPF39-204ENST00000553605 LINC01565O15544 149 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms