RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 LINS1Q8NG48 757 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 ASAP3Q8TDY4 903 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 ZNF775Q96BV0 537 aaPredicted RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 THUMPD2Q9BTF0 503 aaKnown RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 SAP130Q9H0E3 1048 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 LGR6Q9HBX8 967 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 SNTG2Q9NY99 539 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 SWAP70Q9UH65 585 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 MYH14Q7Z406 1995 aaKnown RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 SYCE3A1L190 88 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 EME2A4GXA9 379 aaPredicted RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 CTIFO43310 598 aaKnown RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 CYP2E1P05181 493 aaPredicted RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 GNA15P30679 374 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 VEGFBP49765 207 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 FCGRTP55899 365 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 TAF12Q16514 161 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 SWI5Q1ZZU3 235 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 ANKRD45Q5TZF3 282 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 ALKBH2Q6NS38 261 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 FOXR1Q6PIV2 292 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 HOOK3Q86VS8 718 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 EFCAB13Q8IY85 973 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 CHCHD4Q8N4Q1 142 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 CAMKK1Q8N5S9 505 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 GPT2Q8TD30 523 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 RHBDD1Q8TEB9 315 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 PCDHGA11Q9Y5H2 935 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 H7C1W4 665 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 ZNF189O75820 626 aaPredicted RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 WFS1O76024 890 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 AGR2O95994 175 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 GNAI2P04899 355 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 FAM163BP0C2L3 166 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 VAMP1P23763 118 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 ST5P78524 1137 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 ADCY1Q08828 1119 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 SMAD1Q15797 465 aaKnown RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 G2E3Q7L622 706 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 C3orf20Q8ND61 904 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 PI4K2BQ8TCG2 481 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 ZNF483Q8TF39 744 aaPredicted RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 IRF7Q92985 503 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 ACSBG1Q96GR2 724 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 RUFY1Q96T51 708 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 YIPF4Q9BSR8 244 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 TRIM4Q9C037 500 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 ZC3H12CQ9C0D7 883 aaKnown RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 NACA2Q9H009 215 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 TSPAN10Q9H1Z9 355 aaPredicted RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 ODF2LQ9ULJ1 636 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 LUC7L2Q9Y383 392 aaKnown RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 KIF13BQ9NQT8 1826 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 ZNF335Q9H4Z2 1342 aaPredicted RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 SMTNL1A8MU46 457 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 KIF2AO00139 706 aaPredicted RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 CBFA2T2O43439 604 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 MYO1BO43795 1136 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 SKAP2O75563 359 aaPredicted RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 ERLIN2O94905 339 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 PDGFRBP09619 1106 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 FLT3P36888 993 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 GJA8P48165 433 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 SMTNP53814 917 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 SLC7A5Q01650 507 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 DCTN1Q14203 1278 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 RASA3Q14644 834 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 ADAT2Q7Z6V5 191 aaKnown RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 NCAPG2Q86XI2 1143 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 RUBCNQ92622 972 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 DDX11Q96FC9 970 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 CCDC114Q96M63 670 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 BAG1Q99933 345 aaPredicted RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 ARGLU1Q9NWB6 273 aaPredicted RBP4.51□□□□□ -1.69
RDH11-204ENST00000553578 MYO6Q9UM54 1294 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 LEMD3Q9Y2U8 911 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 PALLDQ8WX93 1383 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 LAMB1P07942 1786 aa4.51□□□□□ -1.69
RDH11-204ENST00000553578 A6NJY4 79 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 CIAO1O76071 339 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 CHGBP05060 677 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 PLA2G4AP47712 749 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 MAPK10P53779 464 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 ZNF445P59923 1031 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 TBC1D25Q3MII6 688 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 NPAS3Q8IXF0 933 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 CCDC155Q8N6L0 562 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 SMCR8Q8TEV9 937 aaPredicted RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 METTL22Q9BUU2 404 aaPredicted RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 GRIP2Q9C0E4 1043 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 SIL1Q9H173 461 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 KANSL2Q9H9L4 492 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 UTP6Q9NYH9 597 aaKnown RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 ATP8A1Q9Y2Q0 1164 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 OPA1O60313 960 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 ESRRAP11474 423 aaPredicted RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 VCAM1P19320 739 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 GEMIN4P57678 1058 aaKnown RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 DGKZQ13574 1117 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms