RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	YARS	P54577	528 aa	Known RBP	6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	ZP2	Q05996	745 aa		6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	IKZF1	Q13422	519 aa		6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	R3HDM1	Q15032	1099 aa	Known RBP	6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	RALBP1	Q15311	655 aa		6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	AMOT	Q4VCS5	1084 aa		6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	THAP5	Q7Z6K1	395 aa		6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	ATG4D	Q86TL0	474 aa	Predicted RBP	6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	RBBP8NL	Q8NC74	664 aa	Predicted RBP	6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	PIWIL2	Q8TC59	973 aa	Known RBP	6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	DUSP15	Q9H1R2	295 aa	Predicted RBP	6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	RC3H2	Q9HBD1	1191 aa	Known RBP	6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	PKD1L3	Q7Z443	1732 aa		6.15	□□□□□ -1.42
ATXN3-222	ENST00000553570	TAF1L	Q8IZX4	1826 aa		6.15	□□□□□ -1.43
ATXN3-222	ENST00000553570	DISP2	A7MBM2	1401 aa		6.15	□□□□□ -1.43
ATXN3-222	ENST00000553570	TNS2	Q63HR2	1409 aa		6.15	□□□□□ -1.43
ATXN3-222	ENST00000553570	SLC22A31	A6NKX4	558 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	WASH4P	A8MWX3	477 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	SMAD7	O15105	426 aa	Known RBP	6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	CYP27B1	O15528	508 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	ANP32C	O43423	234 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	KLF4	O43474	513 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	SRF	P11831	508 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	IMPDH2	P12268	514 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	TXNRD1	Q16881	649 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	ANKS3	Q6ZW76	656 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	LSR	Q86X29	649 aa	Predicted RBP	6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	BAHD1	Q8TBE0	780 aa	Predicted RBP	6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	UBE2F	Q969M7	185 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	CAMKK2	Q96RR4	588 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	CRBN	Q96SW2	442 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	C19orf73	Q9NVV2	129 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	TMOD3	Q9NYL9	352 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	PRKAG3	Q9UGI9	489 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	RNF114	Q9Y508	228 aa		6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.14	□□□□□ -1.43
ATXN3-222	ENST00000553570	NUP188	Q5SRE5	1749 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	MEIS3P2	A8K0S8	358 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	PLSCR1	O15162	318 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	HSP90AB1	P08238	724 aa	Known RBP	6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	PHKG2	P15735	406 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	PRKAR2B	P31323	418 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	WDR43	Q15061	677 aa	Known RBP eCLIP	6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	GAB4	Q2WGN9	574 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	CCDC144B	Q3MJ40	725 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	SOGA3	Q5TF21	947 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	RUFY4	Q6ZNE9	571 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	CKAP2L	Q8IYA6	745 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	FLAD1	Q8NFF5	587 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	CARS2	Q9HA77	564 aa	Known RBP	6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	STK32B	Q9NY57	414 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	KLHL3	Q9UH77	587 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	IGSF1	Q8N6C5	1336 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	NPC1L1	Q9UHC9	1359 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	LY75	O60449	1722 aa		6.13	□□□□□ -1.43
ATXN3-222	ENST00000553570	LRRN2	O75325	713 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	ESR1	P03372	595 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	MTHFSD	Q2M296	383 aa	Known RBP	6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	CCDC146	Q8IYE0	955 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	DTWD2	Q8NBA8	298 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	OR6P1	Q8NGX9	317 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	RNF141	Q8WVD5	230 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	HNRNPLL	Q8WVV9	542 aa	Known RBP	6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	TMEM40	Q8WWA1	233 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	PIGB	Q92521	554 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	RTF1	Q92541	710 aa	Known RBP	6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	RREB1	Q92766	1687 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	ASIC4	Q96FT7	647 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	PHACTR3	Q96KR7	559 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	EP400	Q96L91	3159 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	CCDC74B	Q96LY2	380 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	KREMEN1	Q96MU8	473 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	GPR62	Q9BZJ7	368 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	PNN	Q9H307	717 aa	Known RBP	6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	TFCP2L1	Q9NZI6	479 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	GMIP	Q9P107	970 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	ZSWIM5	Q9P217	1185 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	CCNL1	Q9UK58	526 aa	Predicted RBP	6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	CTNND2	Q9UQB3	1225 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	TOGARAM1	Q9Y4F4	1720 aa		6.12	□□□□□ -1.43
ATXN3-222	ENST00000553570	TUBGCP6	Q96RT7	1819 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	MYBBP1A	Q9BQG0	1328 aa	Known RBP	6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	MAPK8IP3	Q9UPT6	1336 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	ERVV-2	B6SEH9	535 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	RGS13	O14921	159 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	UBOX5	O94941	541 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	TEF	Q10587	303 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	SERINC3	Q13530	473 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	RAB33A	Q14088	237 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	LRRFIP1	Q32MZ4	808 aa	Known RBP	6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	CDCP2	Q5VXM1	449 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	OVOS1	Q6IE37	1185 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	SMARCC1	Q92922	1105 aa	Predicted RBP	6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	ATG4C	Q96DT6	458 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	KIF2C	Q99661	725 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	ASAP1	Q9ULH1	1129 aa		6.11	□□□□□ -1.43
ATXN3-222	ENST00000553570	C5	P01031	1676 aa		6.1	□□□□□ -1.43
ATXN3-222	ENST00000553570	RNMT	O43148	476 aa	Known RBP	6.1	□□□□□ -1.43
ATXN3-222	ENST00000553570	SLC39A6	Q13433	755 aa		6.1	□□□□□ -1.43
ATXN3-222	ENST00000553570	DCTN1	Q14203	1278 aa		6.1	□□□□□ -1.43

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