RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 POLR2MP0CAP2 368 aa21.09■□□□□ 0.97
SHMT2-206ENST00000553529 ZNF286BP0CG31 522 aa21.09■□□□□ 0.97
SHMT2-206ENST00000553529 FAM47CQ5HY64 1035 aa21.09■□□□□ 0.97
SHMT2-206ENST00000553529 MFSD5Q6N075 450 aa21.09■□□□□ 0.97
SHMT2-206ENST00000553529 KAT2BQ92831 832 aa21.09■□□□□ 0.97
SHMT2-206ENST00000553529 RNPC3Q96LT9 517 aaKnown RBP21.09■□□□□ 0.97
SHMT2-206ENST00000553529 MTG1Q9BT17 334 aaPredicted RBP21.09■□□□□ 0.97
SHMT2-206ENST00000553529 NOC4LQ9BVI4 516 aaKnown RBP21.09■□□□□ 0.97
SHMT2-206ENST00000553529 RTEL1Q9NZ71 1219 aa21.09■□□□□ 0.97
SHMT2-206ENST00000553529 ZEB2O60315 1214 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 CABYRO75952 493 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 LIFRP42702 1097 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 CPT1AP50416 773 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 MRPS9P82933 396 aaKnown RBP21.08■□□□□ 0.97
SHMT2-206ENST00000553529 UBE2SQ16763 222 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 TYW1BQ6NUM6 668 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 TMTC3Q6ZXV5 915 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 IWS1Q96ST2 819 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 HIPK3Q9H422 1215 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 SLC12A7Q9Y666 1083 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 MRVI1Q9Y6F6 885 aa21.08■□□□□ 0.97
SHMT2-206ENST00000553529 MEIS2O14770 477 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 PPFIA3O75145 1194 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 GH1P01241 217 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 SEMA3FQ13275 785 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 HIC1Q14526 733 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 TMEM240Q5SV17 173 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 APOA5Q6Q788 366 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 RRP36Q96EU6 259 aaKnown RBP21.07■□□□□ 0.96
SHMT2-206ENST00000553529 GUCD1Q96NT3 240 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 CTAGE1Q96RT6 745 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 MPHOSPH6Q99547 160 aaKnown RBP21.07■□□□□ 0.96
SHMT2-206ENST00000553529 POLR3EQ9NVU0 708 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 MTMR10Q9NXD2 777 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 CXXC1Q9P0U4 656 aaPredicted RBP21.07■□□□□ 0.96
SHMT2-206ENST00000553529 SNX14Q9Y5W7 946 aa21.07■□□□□ 0.96
SHMT2-206ENST00000553529 CNTNAP5Q8WYK1 1306 aa21.06■□□□□ 0.96
SHMT2-206ENST00000553529 ADAMTS3O15072 1205 aa21.06■□□□□ 0.96
SHMT2-206ENST00000553529 NKRFO15226 690 aaKnown RBP eCLIP21.06■□□□□ 0.96
SHMT2-206ENST00000553529 TLR3O15455 904 aaKnown RBP21.06■□□□□ 0.96
SHMT2-206ENST00000553529 EIF3JO75822 258 aaKnown RBP21.06■□□□□ 0.96
SHMT2-206ENST00000553529 UBA1P22314 1058 aaKnown RBP21.06■□□□□ 0.96
SHMT2-206ENST00000553529 CDC27P30260 824 aa21.06■□□□□ 0.96
SHMT2-206ENST00000553529 ZNF365Q70YC5 407 aa21.06■□□□□ 0.96
SHMT2-206ENST00000553529 VSIG10LQ86VR7 867 aa21.06■□□□□ 0.96
SHMT2-206ENST00000553529 FANCBQ8NB91 859 aa21.06■□□□□ 0.96
SHMT2-206ENST00000553529 MAP3K14Q99558 947 aa21.06■□□□□ 0.96
SHMT2-206ENST00000553529 TTYH1Q9H313 450 aaPredicted RBP21.06■□□□□ 0.96
SHMT2-206ENST00000553529 FAM217BQ9NTX9 383 aaPredicted RBP21.06■□□□□ 0.96
SHMT2-206ENST00000553529 KIF5BP33176 963 aa21.05■□□□□ 0.96
SHMT2-206ENST00000553529 PBX2P40425 430 aa21.05■□□□□ 0.96
SHMT2-206ENST00000553529 HSDL1Q3SXM5 330 aa21.05■□□□□ 0.96
SHMT2-206ENST00000553529 DHX32Q7L7V1 743 aaKnown RBP21.05■□□□□ 0.96
SHMT2-206ENST00000553529 SGMS1Q86VZ5 419 aa21.05■□□□□ 0.96
SHMT2-206ENST00000553529 PGBD1Q96JS3 809 aa21.05■□□□□ 0.96
SHMT2-206ENST00000553529 JAKMIP1Q96N16 626 aaKnown RBP21.05■□□□□ 0.96
SHMT2-206ENST00000553529 FRMPD4Q14CM0 1322 aa21.04■□□□□ 0.96
SHMT2-206ENST00000553529 KLF18A0A0U1RQI7 1052 aa21.04■□□□□ 0.96
SHMT2-206ENST00000553529 GGPS1O95749 300 aa21.04■□□□□ 0.96
SHMT2-206ENST00000553529 ZNF200P98182 395 aaPredicted RBP21.04■□□□□ 0.96
SHMT2-206ENST00000553529 APOBRQ0VD83 1088 aa21.04■□□□□ 0.96
SHMT2-206ENST00000553529 FUT2Q10981 343 aa21.04■□□□□ 0.96
SHMT2-206ENST00000553529 RNF20Q5VTR2 975 aa21.04■□□□□ 0.96
SHMT2-206ENST00000553529 WWC2Q6AWC2 1192 aa21.04■□□□□ 0.96
SHMT2-206ENST00000553529 GDF6Q6KF10 455 aaPredicted RBP21.04■□□□□ 0.96
SHMT2-206ENST00000553529 ALG1Q9BT22 464 aa21.04■□□□□ 0.96
SHMT2-206ENST00000553529 MTA3Q9BTC8 594 aa21.04■□□□□ 0.96
SHMT2-206ENST00000553529 GBF1Q92538 1859 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 COL6A3P12111 3177 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 B4DLN1 442 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 CCND2P30279 289 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 HSPA4P34932 840 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 MRPL12P52815 198 aaKnown RBP21.03■□□□□ 0.96
SHMT2-206ENST00000553529 TSGA10IPQ3SY00 556 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 HEATR3Q7Z4Q2 680 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 SMARCC2Q8TAQ2 1214 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 KCNB2Q92953 911 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 WNT8BQ93098 351 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 SEC63Q9UGP8 760 aaKnown RBP21.03■□□□□ 0.96
SHMT2-206ENST00000553529 NAP1L2Q9ULW6 460 aaPredicted RBP21.03■□□□□ 0.96
SHMT2-206ENST00000553529 TANC1Q9C0D5 1861 aa21.03■□□□□ 0.96
SHMT2-206ENST00000553529 CELF3Q5SZQ8 465 aaKnown RBP21.02■□□□□ 0.96
SHMT2-206ENST00000553529 MYSM1Q5VVJ2 828 aa21.02■□□□□ 0.96
SHMT2-206ENST00000553529 Q6ZUG5 572 aa21.02■□□□□ 0.96
SHMT2-206ENST00000553529 OTOP2Q7RTS6 562 aa21.02■□□□□ 0.96
SHMT2-206ENST00000553529 DEFB128Q7Z7B8 93 aa21.02■□□□□ 0.96
SHMT2-206ENST00000553529 DHX37Q8IY37 1157 aaKnown RBP21.02■□□□□ 0.96
SHMT2-206ENST00000553529 DHX38Q92620 1227 aaKnown RBP21.02■□□□□ 0.96
SHMT2-206ENST00000553529 LARP6Q9BRS8 491 aaKnown RBP21.02■□□□□ 0.96
SHMT2-206ENST00000553529 CDH23Q9H251 3354 aa21.02■□□□□ 0.96
SHMT2-206ENST00000553529 GOLGA8AA7E2F4 631 aa21.01■□□□□ 0.95
SHMT2-206ENST00000553529 GOLGA8BA8MQT2 603 aa21.01■□□□□ 0.95
SHMT2-206ENST00000553529 DTNBO60941 627 aa21.01■□□□□ 0.95
SHMT2-206ENST00000553529 SP4Q02446 784 aa21.01■□□□□ 0.95
SHMT2-206ENST00000553529 PPIGQ13427 754 aaKnown RBP eCLIP21.01■□□□□ 0.953e-10■□□□□ 10.6
SHMT2-206ENST00000553529 RTN1Q16799 776 aa21.01■□□□□ 0.95
SHMT2-206ENST00000553529 TMTC2Q8N394 836 aa21.01■□□□□ 0.95
SHMT2-206ENST00000553529 TMEM199Q8N511 208 aa21.01■□□□□ 0.95
SHMT2-206ENST00000553529 SPATA33Q96N06 139 aa21.01■□□□□ 0.95
SHMT2-206ENST00000553529 MAF1Q9H063 256 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms