RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PICALMQ13492 652 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 ANKRD40Q6AI12 368 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 MOXD1Q6UVY6 613 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 ADGRF4Q8IZF3 695 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 LARGE2Q8N3Y3 721 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 MSL3Q8N5Y2 521 aaKnown RBP14.39□□□□□ -0.11
SHMT2-205ENST00000553474 RAD54LQ92698 747 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 MKL1Q969V6 931 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 BLOC1S4Q9NUP1 217 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 USP40Q9NVE5 1235 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 PSMD14O00487 310 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 KRT86O43790 486 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 HNRNPH3P31942 346 aaKnown RBP14.39□□□□□ -0.11
SHMT2-205ENST00000553474 SHMT1P34896 483 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 MTIF2P46199 727 aaKnown RBP14.39□□□□□ -0.11
SHMT2-205ENST00000553474 TMEM119Q4V9L6 283 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 HYIQ5T013 277 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 TEX35Q5T0J7 233 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 ACRBPQ8NEB7 543 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 PLIN2Q99541 437 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 NOC4LQ9BVI4 516 aaKnown RBP14.39□□□□□ -0.11
SHMT2-205ENST00000553474 IRX2Q9BZI1 471 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-205ENST00000553474 DDX4Q9NQI0 724 aaKnown RBP14.39□□□□□ -0.11
SHMT2-205ENST00000553474 STK24Q9Y6E0 443 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 FRMPD2Q68DX3 1309 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-205ENST00000553474 PSME4Q14997 1843 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 B4DLN1 442 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 EIF3CLB5ME19 914 aaKnown RBP14.38□□□□□ -0.11
SHMT2-205ENST00000553474 RNF225M0QZC1 329 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-205ENST00000553474 PES1O00541 588 aaKnown RBP14.38□□□□□ -0.11
SHMT2-205ENST00000553474 COBLO75128 1261 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 USP11P51784 963 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 EHHADHQ08426 723 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 CDC42EP5Q6NZY7 148 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 CC2D1AQ6P1N0 951 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-205ENST00000553474 LRRC47Q8N1G4 583 aaKnown RBP14.38□□□□□ -0.11
SHMT2-205ENST00000553474 SLC35F6Q8N357 371 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 CERS5Q8N5B7 392 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 KIAA0895Q8NCT3 520 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 MSANTD4Q8NCY6 345 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 DCAF4Q8WV16 495 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 COA7Q96BR5 231 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 RPGRIP1Q96KN7 1286 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 ZDHHC15Q96MV8 337 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 EIF3CQ99613 913 aaKnown RBP14.38□□□□□ -0.11
SHMT2-205ENST00000553474 EDEM3Q9BZQ6 932 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 TSGA10Q9BZW7 698 aa14.38□□□□□ -0.11
SHMT2-205ENST00000553474 ECE2O60344 883 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 MIIPQ5JXC2 388 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 WDR59Q6PJI9 974 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 SNX29Q8TEQ0 813 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 PNMA5Q96PV4 448 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 TSG101Q99816 390 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 SLF1Q9BQI6 1058 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 PARD6BQ9BYG5 372 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 BMP2KQ9NSY1 1161 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-205ENST00000553474 TMEM260Q9NX78 707 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 NYAP2Q9P242 653 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 DDX25Q9UHL0 483 aaKnown RBP14.37□□□□□ -0.11
SHMT2-205ENST00000553474 RAB21Q9UL25 225 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 LTBP3Q9NS15 1303 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 ANO9A1A5B4 782 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 CTAGE15A4D2H0 777 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 SLC37A4O43826 429 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 ERLIN1O75477 346 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 CTAGE8P0CG41 777 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 AP3B2Q13367 1082 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 MAN2A1Q16706 1144 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 APOBEC3HQ6NTF7 200 aaKnown RBP14.37□□□□□ -0.11
SHMT2-205ENST00000553474 CTAGE6Q86UF2 777 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 CTAGE4Q8IX94 777 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 NIM1KQ8IY84 436 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 TXLNBQ8N3L3 684 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 CHP1Q99653 195 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 IDI2Q9BXS1 227 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 GBP3Q9H0R5 595 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 PSTPIP2Q9H939 334 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 KANSL2Q9H9L4 492 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 PLAGL2Q9UPG8 496 aa14.37□□□□□ -0.11
SHMT2-205ENST00000553474 ZNF646O15015 1829 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-205ENST00000553474 MYMKA6NI61 221 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 GRIN3BO60391 1043 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 TDP2O95551 362 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 FCER1AP12319 257 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 TNNI2P48788 182 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 PRELPP51888 382 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 AMPD2Q01433 879 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 TERF2Q15554 542 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 SLFN12Q8IYM2 578 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 KCTD17Q8N5Z5 321 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 JDP2Q8WYK2 163 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 GPCPD1Q9NPB8 672 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 PI4KBQ9UBF8 816 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 MYO6Q9UM54 1294 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 SYNPO2Q9UMS6 1093 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 PCDHA12Q9UN75 941 aa14.36□□□□□ -0.11
SHMT2-205ENST00000553474 CYP3A7-CYP3A51PA0A087WV96 503 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 EDIL3O43854 480 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 CYP3A7P24462 503 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms