RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 HOXA13P31271 388 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 ZNF76P36508 570 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 USP11P51784 963 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 SOX10P56693 466 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 NIPA1Q7RTP0 329 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 DAGLBQ8NCG7 672 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 EMID1Q96A84 441 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 FGD4Q96M96 766 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 GLT1D1Q96MS3 346 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 UPF3AQ9H1J1 476 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 C11orf49Q9H6J7 331 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 PCDHA6Q9UN73 950 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 PCDHA8Q9Y5H6 950 aa11.73□□□□□ -0.53
TRAFD1-208ENST00000552890 OPLAHO14841 1288 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 C6orf222P0C671 652 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 EN2P19622 333 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 PDCP20941 246 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 ICAM3P32942 547 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 SETQ01105 290 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 TRIM32Q13049 653 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 COL9A3Q14050 684 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 ME3Q16798 604 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 GNASQ5JWF2 1037 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 C1orf53Q5VUE5 145 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 TAPT1Q6NXT6 567 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 KRT25Q7Z3Z0 450 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 TLK2Q86UE8 772 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 GPKOWQ92917 476 aaPredicted RBP eCLIP11.72□□□□□ -0.538e-6■■□□□ 13.6
TRAFD1-208ENST00000552890 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 KATNAL1Q9BW62 490 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 PCDHA4Q9UN74 947 aa11.72□□□□□ -0.53
TRAFD1-208ENST00000552890 CCDC194A0A1B0GVG4 234 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 CAPN15O75808 1086 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 CYP3A4P08684 503 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 GCFC2P16383 781 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 SREBF1P36956 1147 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 LRRC41Q15345 812 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 PKN1Q16512 942 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 DGKDQ16760 1214 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 CEP55Q53EZ4 464 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 PRAMEF19Q5SWL8 479 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 SEPT14Q6ZU15 432 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 FBXO16Q8IX29 292 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 DHX37Q8IY37 1157 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 BLIDQ8IZY5 108 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 TRPV1Q8NER1 839 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 KIF2CQ99661 725 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 ALG1Q9BT22 464 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 KATNBL1Q9H079 304 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 PHF24Q9UPV7 400 aa11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 GNEQ9Y223 722 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-208ENST00000552890 hCG_1642624A0A1W2PR95 340 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 DYNC1LI2O43237 492 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 PPFIA4O75335 1185 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 CLK2P49760 499 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 MTMR1Q13613 665 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 GNL2Q13823 731 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 NONOQ15233 471 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 MOXD1Q6UVY6 613 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 EEPD1Q7L9B9 569 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 NSUN7Q8NE18 718 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 KLHDC9Q8NEP7 349 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 OR6J1Q8NGC5 347 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 PPTC7Q8NI37 304 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 TBC1D5Q92609 795 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 ANO3Q9BYT9 981 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 MLXIPQ9HAP2 919 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 TBC1D22BQ9NU19 505 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 COL20A1Q9P218 1284 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 PRKAG2Q9UGJ0 569 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 DDX41Q9UJV9 622 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 SMCHD1A6NHR9 2005 aa11.7□□□□□ -0.54
TRAFD1-208ENST00000552890 HTTP42858 3142 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 SYNRGQ9UMZ2 1314 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 A6NJR5 290 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 SPATA31C2B4DYI2 1134 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 ADAMTS4O75173 837 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 MYCNP04198 464 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 SUPT20HL2P0C7V6 817 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 SMPD1P17405 629 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 TAL1P17542 331 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 KRT2P35908 639 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 ADCYAP1R1P41586 468 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 ARHGAP4P98171 946 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 PTPN11Q06124 597 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 ORC2Q13416 577 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 CCDC62Q6P9F0 684 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 METTL7BQ6UX53 244 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 VTI1AQ96AJ9 217 aa11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 INTS4Q96HW7 963 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 PAWRQ96IZ0 340 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-208ENST00000552890 C8orf76Q96K31 380 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms