RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 C9orf50Q5SZB4 431 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 USP17L6PQ6QN14 398 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 VSIG10LQ86VR7 867 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 SLC43A3Q8NBI5 491 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 SMARCC2Q8TAQ2 1214 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 PPP1R13LQ8WUF5 828 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 TRPV6Q9H1D0 765 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 DDX41Q9UJV9 622 aaKnown RBP12.6□□□□□ -0.39
TMEM116-215ENST00000552374 SNX14Q9Y5W7 946 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 FRMPD3Q5JV73 1810 aa12.6□□□□□ -0.39
TMEM116-215ENST00000552374 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
TMEM116-215ENST00000552374 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 ZBTB43O43298 467 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 B4GALT4O60513 344 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 CCND2P30279 289 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 HSPA4P34932 840 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 FPGSQ05932 587 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 NBPF20Q3BBV1 942 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 APOA5Q6Q788 366 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 Q6ZUG5 572 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 TMTC3Q6ZXV5 915 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 DHX37Q8IY37 1157 aaKnown RBP12.59□□□□□ -0.39
TMEM116-215ENST00000552374 IL31RAQ8NI17 732 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 SEZ6LQ9BYH1 1024 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 PSTPIP2Q9H939 334 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 RTEL1Q9NZ71 1219 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 TBX21Q9UL17 535 aa12.59□□□□□ -0.39
TMEM116-215ENST00000552374 CD4P01730 458 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 CASTP20810 708 aaKnown RBP12.58□□□□□ -0.4
TMEM116-215ENST00000552374 CYP2C18P33260 490 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 EPHB4P54760 987 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 ARHGAP1Q07960 439 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 LAMC2Q13753 1193 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 RTN1Q16799 776 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 ERICH6BQ5W0A0 696 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 MFSD5Q6N075 450 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 BLOC1S2Q6QNY1 142 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 HEATR3Q7Z4Q2 680 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 KCNB2Q92953 911 aa12.58□□□□□ -0.4
TMEM116-215ENST00000552374 ALDH8A1Q9H2A2 487 aaPredicted RBP12.58□□□□□ -0.4
TMEM116-215ENST00000552374 TRMT13Q9NUP7 481 aaKnown RBP12.58□□□□□ -0.4
TMEM116-215ENST00000552374 RBM28Q9NW13 759 aaKnown RBP12.58□□□□□ -0.4
TMEM116-215ENST00000552374 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
TMEM116-215ENST00000552374 LAMA2P24043 3122 aaKnown RBP12.57□□□□□ -0.4
TMEM116-215ENST00000552374 GOLGA8AA7E2F4 631 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 GOLGA8BA8MQT2 603 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 MEIS2O14770 477 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 RGS20O76081 388 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 PSMA5P28066 241 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 APOBRQ0VD83 1088 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 DGKDQ16760 1214 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 KCNV1Q6PIU1 500 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 TMEM199Q8N511 208 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 GPKOWQ92917 476 aaPredicted RBP eCLIP12.57□□□□□ -0.4
TMEM116-215ENST00000552374 HIPK3Q9H422 1215 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 MLXIPQ9HAP2 919 aa12.57□□□□□ -0.4
TMEM116-215ENST00000552374 MMP3P08254 477 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 SUPT20HL2P0C7V6 817 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 ACRP10323 421 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 TGFB3P10600 412 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 CYP2C9P11712 490 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 CSF2RAP15509 400 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 CDC27P30260 824 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 CCL23P55773 120 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 MRPS9P82933 396 aaKnown RBP12.56□□□□□ -0.4
TMEM116-215ENST00000552374 SP2Q02086 613 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 PPIGQ13427 754 aaKnown RBP eCLIP12.56□□□□□ -0.4
TMEM116-215ENST00000552374 UBE2SQ16763 222 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 GNPTABQ3T906 1256 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 Q7L0L9 218 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 DEFB123Q8N688 67 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 BRF1Q92994 677 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 RNPC3Q96LT9 517 aaKnown RBP12.56□□□□□ -0.4
TMEM116-215ENST00000552374 SPATA33Q96N06 139 aa12.56□□□□□ -0.4
TMEM116-215ENST00000552374 PIK3CDO00329 1044 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 GGPS1O95749 300 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 RPS6KB1P23443 525 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 ADD1P35611 737 aaKnown RBP12.55□□□□□ -0.4
TMEM116-215ENST00000552374 METAP2P50579 478 aaKnown RBP eCLIP12.55□□□□□ -0.4
TMEM116-215ENST00000552374 CELF3Q5SZQ8 465 aaKnown RBP12.55□□□□□ -0.4
TMEM116-215ENST00000552374 MYSM1Q5VVJ2 828 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 NFRKBQ6P4R8 1299 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 C16orf59Q7L2K0 433 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 EMID1Q96A84 441 aaPredicted RBP12.55□□□□□ -0.4
TMEM116-215ENST00000552374 ALG1Q9BT22 464 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 USP26Q9BXU7 913 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 BCAS3Q9H6U6 928 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 FAM217BQ9NTX9 383 aaPredicted RBP12.55□□□□□ -0.4
TMEM116-215ENST00000552374 NOD1Q9Y239 953 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 UMODL1Q5DID0 1318 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 LCTP09848 1927 aa12.55□□□□□ -0.4
TMEM116-215ENST00000552374 SPDYE3A6NKU9 549 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 PPFIA4O75335 1185 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 STAM2O75886 525 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 NAPAP54920 295 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 FUT2Q10981 343 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 HSDL1Q3SXM5 330 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 WWC2Q6AWC2 1192 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 GPR153Q6NV75 609 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms