RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 GH1P01241 217 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 TGFB3P10600 412 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 CPA1P15085 419 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 RAG1P15918 1043 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 RPS6KB1P23443 525 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 CCND2P30279 289 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 PURAQ00577 322 aaKnown RBP21.89■■□□□ 1.09
DDX54-208ENST00000551344 LY6KQ17RY6 165 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 FAM126BQ8IXS8 530 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 SMARCC2Q8TAQ2 1214 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 BADQ92934 168 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 PSTPIP2Q9H939 334 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 MRVI1Q9Y6F6 885 aa21.89■■□□□ 1.09
DDX54-208ENST00000551344 GRIN2DO15399 1336 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 CCDC196A0A1B0GTZ2 297 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 GOLGA8AA7E2F4 631 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 GOLGA8BA8MQT2 603 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 MEIS2O14770 477 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 STAM2O75886 525 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 MYL3P08590 195 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 FUT2Q10981 343 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 USP17L6PQ6QN14 398 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 MTG1Q9BT17 334 aaPredicted RBP21.88■■□□□ 1.09
DDX54-208ENST00000551344 AGXT2Q9BYV1 514 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 FAM217BQ9NTX9 383 aaPredicted RBP21.88■■□□□ 1.09
DDX54-208ENST00000551344 PCDH10Q9P2E7 1040 aa21.88■■□□□ 1.09
DDX54-208ENST00000551344 hCG_1642624A0A1W2PR95 340 aa21.87■■□□□ 1.09
DDX54-208ENST00000551344 RGS20O76081 388 aa21.87■■□□□ 1.09
DDX54-208ENST00000551344 CD4P01730 458 aa21.87■■□□□ 1.09
DDX54-208ENST00000551344 CASTP20810 708 aaKnown RBP21.87■■□□□ 1.09
DDX54-208ENST00000551344 ITGB8P26012 769 aa21.87■■□□□ 1.09
DDX54-208ENST00000551344 LAMC2Q13753 1193 aa21.87■■□□□ 1.09
DDX54-208ENST00000551344 BRF1Q92994 677 aa21.87■■□□□ 1.09
DDX54-208ENST00000551344 EMID1Q96A84 441 aaPredicted RBP21.87■■□□□ 1.09
DDX54-208ENST00000551344 ZSWIM6Q9HCJ5 1215 aa21.87■■□□□ 1.09
DDX54-208ENST00000551344 TBX21Q9UL17 535 aa21.87■■□□□ 1.09
DDX54-208ENST00000551344 NAP1L2Q9ULW6 460 aaPredicted RBP21.87■■□□□ 1.09
DDX54-208ENST00000551344 FRMPD4Q14CM0 1322 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 TIMP1P01033 207 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 CDC27P30260 824 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 METAP2P50579 478 aaKnown RBP eCLIP21.86■■□□□ 1.09
DDX54-208ENST00000551344 PSMC6P62333 389 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 ARHGAP1Q07960 439 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 APOBRQ0VD83 1088 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 LRIT3Q3SXY7 679 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 XRRA1Q6P2D8 792 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 RUFY3Q7L099 469 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 TEX2Q8IWB9 1127 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 IL31RAQ8NI17 732 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 AFG1LQ8WV93 481 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 TM6SF1Q9BZW5 370 aa21.86■■□□□ 1.09
DDX54-208ENST00000551344 V9GY48 417 aaPredicted RBP21.86■■□□□ 1.09
DDX54-208ENST00000551344 CNTNAP5Q8WYK1 1306 aa21.85■■□□□ 1.09
DDX54-208ENST00000551344 GNPTABQ3T906 1256 aa21.85■■□□□ 1.09
DDX54-208ENST00000551344 HEATR3Q7Z4Q2 680 aa21.85■■□□□ 1.09
DDX54-208ENST00000551344 hCG_1984214I3L0E3 225 aa21.84■■□□□ 1.09
DDX54-208ENST00000551344 ADD1P35611 737 aaKnown RBP21.84■■□□□ 1.09
DDX54-208ENST00000551344 EVCP57679 992 aa21.84■■□□□ 1.09
DDX54-208ENST00000551344 MRPS9P82933 396 aaKnown RBP21.84■■□□□ 1.09
DDX54-208ENST00000551344 DHX37Q8IY37 1157 aaKnown RBP21.84■■□□□ 1.09
DDX54-208ENST00000551344 ZNF713Q8N859 430 aaPredicted RBP21.84■■□□□ 1.09
DDX54-208ENST00000551344 CYP46A1Q9Y6A2 500 aa21.84■■□□□ 1.09
DDX54-208ENST00000551344 KIAA1217Q5T5P2 1943 aa21.84■■□□□ 1.09
DDX54-208ENST00000551344 EIF5BO60841 1220 aaKnown RBP21.83■■□□□ 1.09
DDX54-208ENST00000551344 MMP3P08254 477 aa21.83■■□□□ 1.09
DDX54-208ENST00000551344 SUPT20HL2P0C7V6 817 aa21.83■■□□□ 1.09
DDX54-208ENST00000551344 ICAM3P32942 547 aa21.83■■□□□ 1.09
DDX54-208ENST00000551344 DGKDQ16760 1214 aa21.83■■□□□ 1.09
DDX54-208ENST00000551344 CELF3Q5SZQ8 465 aaKnown RBP21.83■■□□□ 1.09
DDX54-208ENST00000551344 MYSM1Q5VVJ2 828 aa21.83■■□□□ 1.09
DDX54-208ENST00000551344 PCNX4Q63HM2 1172 aa21.83■■□□□ 1.09
DDX54-208ENST00000551344 MFSD5Q6N075 450 aa21.83■■□□□ 1.09
DDX54-208ENST00000551344 NFRKBQ6P4R8 1299 aa21.83■■□□□ 1.09
DDX54-208ENST00000551344 INPP4AQ96PE3 977 aaPredicted RBP21.83■■□□□ 1.09
DDX54-208ENST00000551344 ALDH8A1Q9H2A2 487 aaPredicted RBP21.83■■□□□ 1.09
DDX54-208ENST00000551344 PPFIA4O75335 1185 aa21.82■■□□□ 1.08
DDX54-208ENST00000551344 FPGSQ05932 587 aa21.82■■□□□ 1.08
DDX54-208ENST00000551344 PTPN11Q06124 597 aaPredicted RBP21.82■■□□□ 1.08
DDX54-208ENST00000551344 NBPF20Q3BBV1 942 aa21.82■■□□□ 1.08
DDX54-208ENST00000551344 WWC2Q6AWC2 1192 aa21.82■■□□□ 1.08
DDX54-208ENST00000551344 PPP1R18Q6NYC8 613 aa21.82■■□□□ 1.08
DDX54-208ENST00000551344 PPTC7Q8NI37 304 aa21.82■■□□□ 1.08
DDX54-208ENST00000551344 GPKOWQ92917 476 aaPredicted RBP eCLIP21.82■■□□□ 1.08
DDX54-208ENST00000551344 ZFP91Q96JP5 570 aaPredicted RBP21.82■■□□□ 1.08
DDX54-208ENST00000551344 SPDYE3A6NKU9 549 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 SPATA31C2B4DYI2 1134 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 B4GALT4O60513 344 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 NAPAP54920 295 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 SP2Q02086 613 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 GLT8D2Q9H1C3 349 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 TRPV6Q9H1D0 765 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 RIC8AQ9NPQ8 531 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 BARHL2Q9NY43 387 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 RTEL1Q9NZ71 1219 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 NID2Q14112 1375 aa21.81■■□□□ 1.08
DDX54-208ENST00000551344 LTBP2Q14767 1821 aa21.8■■□□□ 1.08
DDX54-208ENST00000551344 SOX1O00570 391 aaPredicted RBP21.8■■□□□ 1.08
DDX54-208ENST00000551344 FIBPO43427 364 aa21.8■■□□□ 1.08
DDX54-208ENST00000551344 GGPS1O95749 300 aa21.8■■□□□ 1.08
DDX54-208ENST00000551344 PDIA3P30101 505 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms