RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 X6R8D5 127 aa7.36□□□□□ -1.23
GPN3-209ENST00000551079 FPR2P25090 351 aa7.35□□□□□ -1.23
GPN3-209ENST00000551079 MC3RP41968 323 aa7.35□□□□□ -1.23
GPN3-209ENST00000551079 LSAMPQ13449 338 aa7.35□□□□□ -1.23
GPN3-209ENST00000551079 B3GNT8Q7Z7M8 397 aa7.35□□□□□ -1.23
GPN3-209ENST00000551079 LRRC47Q8N1G4 583 aaKnown RBP7.35□□□□□ -1.23
GPN3-209ENST00000551079 CHAMP1Q96JM3 812 aa7.35□□□□□ -1.23
GPN3-209ENST00000551079 KCNC2Q96PR1 638 aa7.35□□□□□ -1.23
GPN3-209ENST00000551079 COA3Q9Y2R0 106 aaPredicted RBP7.35□□□□□ -1.23
GPN3-209ENST00000551079 SIT1Q9Y3P8 196 aa7.35□□□□□ -1.23
GPN3-209ENST00000551079 PCDHA2Q9Y5H9 948 aa7.35□□□□□ -1.23
GPN3-209ENST00000551079 NPFFR2Q9Y5X5 522 aa7.35□□□□□ -1.23
GPN3-209ENST00000551079 PMF1-BGLAPU3KQ54 211 aa7.35□□□□□ -1.23
GPN3-209ENST00000551079 H7BY64 318 aa7.34□□□□□ -1.23
GPN3-209ENST00000551079 TRIM13O60858 407 aa7.34□□□□□ -1.23
GPN3-209ENST00000551079 SASH1O94885 1247 aa7.34□□□□□ -1.23
GPN3-209ENST00000551079 CACNB2Q08289 660 aaPredicted RBP7.34□□□□□ -1.23
GPN3-209ENST00000551079 VMACQ2NL98 169 aa7.34□□□□□ -1.23
GPN3-209ENST00000551079 NBPF6Q5VWK0 638 aa7.34□□□□□ -1.23
GPN3-209ENST00000551079 DENND5AQ6IQ26 1287 aa7.34□□□□□ -1.23
GPN3-209ENST00000551079 NLRP10Q86W26 655 aa7.34□□□□□ -1.23
GPN3-209ENST00000551079 FNIP1Q8TF40 1166 aa7.34□□□□□ -1.23
GPN3-209ENST00000551079 ZNF669Q96BR6 464 aaPredicted RBP7.34□□□□□ -1.23
GPN3-209ENST00000551079 NBPF4Q96M43 638 aa7.34□□□□□ -1.23
GPN3-209ENST00000551079 AARSD1Q9BTE6 412 aaKnown RBP7.34□□□□□ -1.23
GPN3-209ENST00000551079 SGSM2O43147 1006 aa7.33□□□□□ -1.24
GPN3-209ENST00000551079 LCP1P13796 627 aa7.33□□□□□ -1.24
GPN3-209ENST00000551079 CHRNA2Q15822 529 aa7.33□□□□□ -1.24
GPN3-209ENST00000551079 ETV3LQ6ZN32 361 aa7.33□□□□□ -1.24
GPN3-209ENST00000551079 MILR1Q7Z6M3 343 aa7.33□□□□□ -1.24
GPN3-209ENST00000551079 SP8Q8IXZ3 490 aa7.33□□□□□ -1.24
GPN3-209ENST00000551079 DLX3O60479 287 aa7.32□□□□□ -1.24
GPN3-209ENST00000551079 PLA2G1BP04054 148 aaKnown RBP7.32□□□□□ -1.24
GPN3-209ENST00000551079 FGFR1P11362 822 aa7.32□□□□□ -1.24
GPN3-209ENST00000551079 HTRA3P83110 453 aa7.32□□□□□ -1.24
GPN3-209ENST00000551079 SMARCC2Q8TAQ2 1214 aa7.32□□□□□ -1.24
GPN3-209ENST00000551079 PCDH18Q9HCL0 1135 aa7.32□□□□□ -1.24
GPN3-209ENST00000551079 GPR27Q9NS67 375 aa7.32□□□□□ -1.24
GPN3-209ENST00000551079 CLDND1Q9NY35 253 aa7.32□□□□□ -1.24
GPN3-209ENST00000551079 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
GPN3-209ENST00000551079 FFAR3O14843 346 aa7.31□□□□□ -1.24
GPN3-209ENST00000551079 CYP2C8P10632 490 aa7.31□□□□□ -1.24
GPN3-209ENST00000551079 HOXA5P20719 270 aa7.31□□□□□ -1.24
GPN3-209ENST00000551079 LILRA6Q6PI73 481 aa7.31□□□□□ -1.24
GPN3-209ENST00000551079 RSPO2Q6UXX9 243 aaPredicted RBP7.31□□□□□ -1.24
GPN3-209ENST00000551079 SAPCD2Q86UD0 394 aa7.31□□□□□ -1.24
GPN3-209ENST00000551079 MIB1Q86YT6 1006 aa7.31□□□□□ -1.24
GPN3-209ENST00000551079 ARMC5Q96C12 935 aa7.31□□□□□ -1.24
GPN3-209ENST00000551079 HIRIP3Q9BW71 556 aaPredicted RBP7.31□□□□□ -1.24
GPN3-209ENST00000551079 LUC7LQ9NQ29 371 aaKnown RBP7.31□□□□□ -1.24
GPN3-209ENST00000551079 ARHGEF4Q9NR80 690 aa7.31□□□□□ -1.24
GPN3-209ENST00000551079 FBXL7Q9UJT9 491 aa7.31□□□□□ -1.24
GPN3-209ENST00000551079 PALD1Q9ULE6 856 aa7.31□□□□□ -1.24
GPN3-209ENST00000551079 TRAV20A0A0B4J274 112 aa7.3□□□□□ -1.24
GPN3-209ENST00000551079 HGSO14964 777 aaPredicted RBP7.3□□□□□ -1.24
GPN3-209ENST00000551079 PDPK1O15530 556 aa7.3□□□□□ -1.24
GPN3-209ENST00000551079 PRODHO43272 600 aa7.3□□□□□ -1.24
GPN3-209ENST00000551079 PABPC1P11940 636 aaKnown RBP7.3□□□□□ -1.24
GPN3-209ENST00000551079 GTF2F1P35269 517 aaKnown RBP eCLIP7.3□□□□□ -1.24
GPN3-209ENST00000551079 VWA3BQ502W6 1294 aa7.3□□□□□ -1.24
GPN3-209ENST00000551079 LCE4AQ5TA78 99 aa7.3□□□□□ -1.24
GPN3-209ENST00000551079 NSMFQ6X4W1 530 aa7.3□□□□□ -1.24
GPN3-209ENST00000551079 USP53Q70EK8 1073 aa7.3□□□□□ -1.24
GPN3-209ENST00000551079 ZC3H18Q86VM9 953 aaKnown RBP7.3□□□□□ -1.24
GPN3-209ENST00000551079 TP53I13Q8NBR0 393 aaPredicted RBP7.3□□□□□ -1.24
GPN3-209ENST00000551079 CCDC113Q9H0I3 377 aa7.3□□□□□ -1.24
GPN3-209ENST00000551079 EPB41L1Q9H4G0 881 aa7.3□□□□□ -1.24
GPN3-209ENST00000551079 ZNF652Q9Y2D9 606 aa7.3□□□□□ -1.24
GPN3-209ENST00000551079 SH3D21A4FU49 640 aa7.29□□□□□ -1.24
GPN3-209ENST00000551079 DGKIO75912 1065 aa7.29□□□□□ -1.24
GPN3-209ENST00000551079 CTSWP56202 376 aa7.29□□□□□ -1.24
GPN3-209ENST00000551079 RASGRF1Q13972 1273 aa7.29□□□□□ -1.24
GPN3-209ENST00000551079 DCAF4Q8WV16 495 aa7.29□□□□□ -1.24
GPN3-209ENST00000551079 DDX11Q96FC9 970 aa7.29□□□□□ -1.24
GPN3-209ENST00000551079 PHF20Q9BVI0 1012 aa7.29□□□□□ -1.24
GPN3-209ENST00000551079 KRTAP17-1Q9BYP8 105 aa7.29□□□□□ -1.24
GPN3-209ENST00000551079 NGRNQ9NPE2 291 aaKnown RBP7.29□□□□□ -1.24
GPN3-209ENST00000551079 SIRPGQ9P1W8 387 aa7.29□□□□□ -1.24
GPN3-209ENST00000551079 C8BP07358 591 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 KCNC1P48547 511 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 MTERF2Q49AM1 385 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 EMC4Q5J8M3 183 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 STEAP3Q658P3 488 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 CD300LDQ6UXZ3 194 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 DPH6Q7L8W6 267 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 FAM126BQ8IXS8 530 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 ZNF526Q8TF50 670 aaPredicted RBP7.28□□□□□ -1.24
GPN3-209ENST00000551079 ZBTB8AQ96BR9 441 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 ZFYVE21Q9BQ24 234 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 YIPF4Q9BSR8 244 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 SPATA9Q9BWV2 254 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 XYLT2Q9H1B5 865 aa7.28□□□□□ -1.24
GPN3-209ENST00000551079 CCDC85CA6NKD9 419 aa7.27□□□□□ -1.25
GPN3-209ENST00000551079 MAFKO60675 156 aa7.27□□□□□ -1.25
GPN3-209ENST00000551079 SLURP1P55000 103 aa7.27□□□□□ -1.25
GPN3-209ENST00000551079 IFRD2Q12894 506 aaPredicted RBP7.27□□□□□ -1.25
GPN3-209ENST00000551079 LIPIQ6XZB0 460 aa7.27□□□□□ -1.25
GPN3-209ENST00000551079 TTLL7Q6ZT98 887 aa7.27□□□□□ -1.25
GPN3-209ENST00000551079 LINC00482Q8N8I6 264 aa7.27□□□□□ -1.25
GPN3-209ENST00000551079 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms