RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 TRAF5O00463 557 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 PSMD14O00487 310 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 ZNF263O14978 683 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 MOCS3O95396 460 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 CXCR5P32302 372 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 EIF4A3P38919 411 aaKnown RBP10.22□□□□□ -0.77
UBE2N-205ENST00000550657 STAT3P40763 770 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 APBA1Q02410 837 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 ARID5AQ03989 594 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 C2orf54Q08AI8 447 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 ZNF543Q08ER8 600 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 IKQ13123 557 aaPredicted RBP10.22□□□□□ -0.77
UBE2N-205ENST00000550657 MEA1Q16626 185 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 CCDC40Q4G0X9 1142 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 C15orf52Q6ZUT6 534 aaKnown RBP10.22□□□□□ -0.77
UBE2N-205ENST00000550657 CACNA2D4Q7Z3S7 1137 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 CERS3Q8IU89 383 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 MSANTD4Q8NCY6 345 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 SECISBP2LQ93073 1101 aaKnown RBP10.22□□□□□ -0.77
UBE2N-205ENST00000550657 GJD4Q96KN9 370 aaPredicted RBP10.22□□□□□ -0.77
UBE2N-205ENST00000550657 FGFBP2Q9BYJ0 223 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 IFIH1Q9BYX4 1025 aaKnown RBP10.22□□□□□ -0.77
UBE2N-205ENST00000550657 POLD4Q9HCU8 107 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 KCNQ5Q9NR82 932 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 SMARCAL1Q9NZC9 954 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 GAKO14976 1311 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 PNMA6FA0A0J9YX94 578 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 CCDC66A2RUB6 948 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 LRRC53A6NM62 1247 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 NT5C2P49902 561 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 FAM193AP78312 1265 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 GPS2Q13227 327 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 CASP8Q14790 479 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 TDRD12Q587J7 1177 aaKnown RBP10.22□□□□□ -0.77
UBE2N-205ENST00000550657 CENPPQ6IPU0 288 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 CUL5Q93034 780 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 ZFP91Q96JP5 570 aaPredicted RBP10.22□□□□□ -0.77
UBE2N-205ENST00000550657 DBNDD1Q9H9R9 158 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 RAB21Q9UL25 225 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 PCDHA12Q9UN75 941 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 LAMB1P07942 1786 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 DLEC1Q9Y238 1755 aa10.22□□□□□ -0.77
UBE2N-205ENST00000550657 TRIM37O94972 964 aa10.21□□□□□ -0.77
UBE2N-205ENST00000550657 KRT18P05783 430 aaKnown RBP10.21□□□□□ -0.77
UBE2N-205ENST00000550657 KIAA0825Q8IV33 1275 aa10.21□□□□□ -0.77
UBE2N-205ENST00000550657 CERKQ8TCT0 537 aa10.21□□□□□ -0.77
UBE2N-205ENST00000550657 FAM163AQ96GL9 167 aaPredicted RBP10.21□□□□□ -0.77
UBE2N-205ENST00000550657 ARHGAP20Q9P2F6 1191 aa10.21□□□□□ -0.77
UBE2N-205ENST00000550657 STK17AQ9UEE5 414 aa10.21□□□□□ -0.77
UBE2N-205ENST00000550657 L1RE1Q9UN81 338 aa10.21□□□□□ -0.77
UBE2N-205ENST00000550657 FAN1Q9Y2M0 1017 aa10.21□□□□□ -0.77
UBE2N-205ENST00000550657 BTAF1O14981 1849 aa10.21□□□□□ -0.77
UBE2N-205ENST00000550657 LRRIQ3A6PVS8 624 aaPredicted RBP10.21□□□□□ -0.78
UBE2N-205ENST00000550657 EIF3CLB5ME19 914 aaKnown RBP10.21□□□□□ -0.78
UBE2N-205ENST00000550657 MAP2K7O14733 419 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 FXR2P51116 673 aaKnown RBP eCLIP10.21□□□□□ -0.78
UBE2N-205ENST00000550657 KIF11P52732 1056 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 CDC42EP5Q6NZY7 148 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.78
UBE2N-205ENST00000550657 TMC4Q7Z404 712 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 RETREG2Q8NC44 543 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 HAS1Q92839 578 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 EIF3CQ99613 913 aaKnown RBP10.21□□□□□ -0.78
UBE2N-205ENST00000550657 TSG101Q99816 390 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 TRIM34Q9BYJ4 488 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 UBXN6Q9BZV1 441 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 PANK4Q9NVE7 773 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 ADAM21Q9UKJ8 722 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 CAPN6Q9Y6Q1 641 aa10.21□□□□□ -0.78
UBE2N-205ENST00000550657 ESYT2A0FGR8 921 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 POTEB3A0JP26 581 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 POTECB2RU33 542 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 PDE2AO00408 941 aaPredicted RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 NCK2O43639 380 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 BUB1O43683 1085 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 EIF3JO75822 258 aaKnown RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 HLA-DOAP06340 250 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 SHMT1P34896 483 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 MRPL12P52815 198 aaKnown RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 HNRNPH2P55795 449 aaKnown RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 GFPT1Q06210 699 aaPredicted RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 GABPAQ06546 454 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 COASYQ13057 564 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 MAN2A1Q16706 1144 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 USH1GQ495M9 461 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 HSP90B2PQ58FF3 399 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 POTEBQ6S5H4 581 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 CCDC170Q8IYT3 715 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 MYOCDQ8IZQ8 938 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 EHBP1Q8NDI1 1231 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 ERGIC2Q96RQ1 377 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 PLEKHA4Q9H4M7 779 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 RIC8AQ9NPQ8 531 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 EHD2Q9NZN4 543 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 PCDHA13Q9Y5I0 950 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 FAM170AA1A519 330 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 MEIS1O00470 390 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 USO1O60763 962 aaKnown RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 SLC1A4P43007 532 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms