RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	PDRG1	Q9NUG6	133 aa		13.74	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	POLR3E	Q9NVU0	708 aa		13.74	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	RBM27	Q9P2N5	1060 aa	Known RBP	13.74	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	COLQ	Q9Y215	455 aa	Predicted RBP	13.74	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	MRVI1	Q9Y6F6	885 aa		13.74	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	SMCHD1	A6NHR9	2005 aa		13.74	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	DCDC2C	A8MYV0	355 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	PQBP1	O60828	265 aa	Known RBP	13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	STAM2	O75886	525 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	GH1	P01241	217 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	PDIA3	P30101	505 aa	Known RBP	13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	NAPA	P54920	295 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	TLE2	Q04725	743 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	LY6K	Q17RY6	165 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	KCNV1	Q6PIU1	500 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	ANKRD33	Q7Z3H0	272 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	COPS5	Q92905	334 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	TOX2	Q96NM4	488 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	C22orf23	Q9BZE7	217 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	PDLIM7	Q9NR12	457 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	BARHL2	Q9NY43	387 aa		13.73	□□□□□ -0.21
ARFGAP1-223	ENST00000550188		A6NJR5	290 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	SPDYE3	A6NKU9	549 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	KPNA6	O60684	536 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	RGS20	O76081	388 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	CLTB	P09497	229 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	TGFB3	P10600	412 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	MAGEA10	P43363	369 aa	Predicted RBP	13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	PURA	Q00577	322 aa	Known RBP	13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	ARHGAP1	Q07960	439 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	PFKFB3	Q16875	520 aa	Predicted RBP	13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	GNPTAB	Q3T906	1256 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	HABP4	Q5JVS0	413 aa	Known RBP	13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	PCNX4	Q63HM2	1172 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	XRRA1	Q6P2D8	792 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	EMID1	Q96A84	441 aa	Predicted RBP	13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	IL17RA	Q96F46	866 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	ZNF274	Q96GC6	653 aa	Predicted RBP	13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	GDF15	Q99988	308 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	SEZ6L	Q9BYH1	1024 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	PRO3102	Q9H379	93 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	RIC8A	Q9NPQ8	531 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	DDX41	Q9UJV9	622 aa	Known RBP	13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	MCM3AP	O60318	1980 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	ALPK3	Q96L96	1907 aa		13.72	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	STXBP3	O00186	592 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	ARVCF	O00192	962 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	PRPF3	O43395	683 aa	Known RBP	13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	SEC24B	O95487	1268 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	MYL3	P08590	195 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	SCG2	P13521	617 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	IFNAR1	P17181	557 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	RBM25	P49756	843 aa	Known RBP	13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	CDK7	P50613	346 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	ADCY7	P51828	1080 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	CCT2	P78371	535 aa	Known RBP	13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	AKAP17A	Q02040	695 aa	Known RBP	13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	UBE2S	Q16763	222 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	TYW1B	Q6NUM6	668 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	SLC43A3	Q8NBI5	491 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	INPP4A	Q96PE3	977 aa	Predicted RBP	13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	RNF26	Q9BY78	433 aa	Predicted RBP	13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	GLT8D2	Q9H1C3	349 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188	EHMT1	Q9H9B1	1298 aa		13.71	□□□□□ -0.21
ARFGAP1-223	ENST00000550188		A0A1W2PPC1	479 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	SMCO2	A6NFE2	343 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	TLR3	O15455	904 aa	Known RBP	13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	BMP8B	P34820	402 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	PSMC6	P62333	389 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	MRPS9	P82933	396 aa	Known RBP	13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	FAAP100	Q0VG06	881 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	ITGA7	Q13683	1181 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	LAMC2	Q13753	1193 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	ANKRD1	Q15327	319 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	NTRK3	Q16288	839 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	DHX37	Q8IY37	1157 aa	Known RBP	13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	PPTC7	Q8NI37	304 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	AFG1L	Q8WV93	481 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	PHKB	Q93100	1093 aa		13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	MTG1	Q9BT17	334 aa	Predicted RBP	13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	NCOA5	Q9HCD5	579 aa	Known RBP	13.7	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	MYH6	P13533	1939 aa		13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	TRIM43B	A6NCK2	446 aa		13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	CPLX1	O14810	134 aa		13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	KIAA0355	O15063	1070 aa		13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	FIBP	O43427	364 aa		13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	FOS	P01100	380 aa	Predicted RBP	13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	MMP3	P08254	477 aa		13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	UBA1	P22314	1058 aa	Known RBP	13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	ICAM3	P32942	547 aa		13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	MDM2	Q00987	491 aa	Predicted RBP	13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	CPLX2	Q6PUV4	134 aa	Known RBP	13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	SH3RF1	Q7Z6J0	888 aa		13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	NLRX1	Q86UT6	975 aa		13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	FAM126B	Q8IXS8	530 aa		13.69	□□□□□ -0.22
ARFGAP1-223	ENST00000550188	TRIM22	Q8IYM9	498 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms