RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 IDEP14735 1019 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 SLC16A2P36021 539 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 FAM193AP78312 1265 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 KLRC3Q07444 240 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 TCP10Q12799 353 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 STK4Q13043 487 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 MCM6Q14566 821 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 SPA17Q15506 151 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 MEA1Q16626 185 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 UBE2SQ16763 222 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 WHAMMP3Q1A5X7 153 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 KIF4BQ2VIQ3 1234 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 Q4G0T1 1027 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 VWA3BQ502W6 1294 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 FKBP1CQ5VVH2 108 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 TTBK2Q6IQ55 1244 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 TMCO3Q6UWJ1 677 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 CHURC1Q8WUH1 139 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 DDX12PQ92771 950 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 NAPGQ99747 312 aaPredicted RBP9.95□□□□□ -0.82
TMEM116-209ENST00000550020 DESI2Q9BSY9 194 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 MXD3Q9BW11 206 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 CARD6Q9BX69 1037 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 LZTFL1Q9NQ48 299 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 BLOC1S4Q9NUP1 217 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 PANK4Q9NVE7 773 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 CDC23Q9UJX2 597 aa9.95□□□□□ -0.82
TMEM116-209ENST00000550020 TTC26A0AVF1 554 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 DDTLA6NHG4 134 aaPredicted RBP9.94□□□□□ -0.82
TMEM116-209ENST00000550020 B4DLN1 442 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 PIK3CDO00329 1044 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 PPP1R11O60927 126 aaPredicted RBP9.94□□□□□ -0.82
TMEM116-209ENST00000550020 TADA3O75528 432 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 H2AFXP16104 143 aaPredicted RBP9.94□□□□□ -0.82
TMEM116-209ENST00000550020 MCM3P25205 808 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 SREBF1P36956 1147 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 PMS1P54277 932 aaKnown RBP9.94□□□□□ -0.82
TMEM116-209ENST00000550020 ARHGAP4P98171 946 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 FKBP3Q00688 224 aaKnown RBP9.94□□□□□ -0.82
TMEM116-209ENST00000550020 DLGAP5Q15398 846 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 SLC15A2Q16348 729 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 AOC3Q16853 763 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 ERCC6LQ2NKX8 1250 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 ZNF569Q5MCW4 686 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 FAM26FQ5R3K3 315 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 SRGAP1Q7Z6B7 1085 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 KIAA1328Q86T90 577 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 FAM160B2Q86V87 743 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 KRT222Q8N1A0 295 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 KIFC2Q96AC6 838 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 RPGRIP1Q96KN7 1286 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 CSRNP1Q96S65 589 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 PSMD1Q99460 953 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 DNAJC18Q9H819 358 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 MRPL44Q9H9J2 332 aaKnown RBP9.94□□□□□ -0.82
TMEM116-209ENST00000550020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.94□□□□□ -0.82
TMEM116-209ENST00000550020 SLC39A2Q9NP94 309 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 KCNMB3Q9NPA1 279 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 DDX41Q9UJV9 622 aaKnown RBP9.94□□□□□ -0.82
TMEM116-209ENST00000550020 PNMA2Q9UL42 364 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 FAM184BQ9ULE4 1060 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 DNM3Q9UQ16 869 aa9.94□□□□□ -0.82
TMEM116-209ENST00000550020 GREB1LQ9C091 1923 aaPredicted RBP9.94□□□□□ -0.82
TMEM116-209ENST00000550020 POTEMA6NI47 508 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 EIF3CLB5ME19 914 aaKnown RBP9.93□□□□□ -0.82
TMEM116-209ENST00000550020 PLA2G6O60733 806 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 USO1O60763 962 aaKnown RBP9.93□□□□□ -0.82
TMEM116-209ENST00000550020 ERLIN1O75477 346 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 NDUFB10O96000 172 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 CYP3A4P08684 503 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 MUTP22033 750 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 HNRNPH3P31942 346 aaKnown RBP9.93□□□□□ -0.82
TMEM116-209ENST00000550020 CIITAP33076 1130 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 ZNF76P36508 570 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 STAT2P52630 851 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 ERVK-24P63145 666 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 CKAP4Q07065 602 aaKnown RBP9.93□□□□□ -0.82
TMEM116-209ENST00000550020 MTF1Q14872 753 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 PTPN21Q16825 1174 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 CCDC40Q4G0X9 1142 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 MSL1Q68DK7 614 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 IQCEQ6IPM2 695 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 RSBN1LQ6PCB5 846 aaPredicted RBP9.93□□□□□ -0.82
TMEM116-209ENST00000550020 DYMQ7RTS9 669 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 CLEC10AQ8IUN9 316 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 KIAA0895Q8NCT3 520 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 C7orf43Q8WVR3 580 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 FAM151AQ8WW52 585 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 HAS1Q92839 578 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 CCDC42Q96M95 316 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 WDR24Q96S15 920 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 EIF3CQ99613 913 aaKnown RBP9.93□□□□□ -0.82
TMEM116-209ENST00000550020 GBP3Q9H0R5 595 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 NDST4Q9H3R1 872 aa9.93□□□□□ -0.82
TMEM116-209ENST00000550020 TDRD3Q9H7E2 651 aaKnown RBP9.93□□□□□ -0.82
TMEM116-209ENST00000550020 COL11A2P13942 1736 aaPredicted RBP9.93□□□□□ -0.82
TMEM116-209ENST00000550020 ANO9A1A5B4 782 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 CTAGE15A4D2H0 777 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 PSMD14O00487 310 aa9.92□□□□□ -0.82
TMEM116-209ENST00000550020 TBC1D12O60347 775 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms