RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 INF2Q27J81 1249 aa14.14□□□□□ -0.15
CALCOCO1-217ENST00000549935 CFAP58Q5T655 872 aa14.14□□□□□ -0.15
CALCOCO1-217ENST00000549935 HEATR3Q7Z4Q2 680 aa14.14□□□□□ -0.15
CALCOCO1-217ENST00000549935 PCMTD1Q96MG8 357 aaPredicted RBP14.14□□□□□ -0.15
CALCOCO1-217ENST00000549935 TRIM9Q9C026 710 aa14.14□□□□□ -0.15
CALCOCO1-217ENST00000549935 SAMM50Q9Y512 469 aa14.14□□□□□ -0.15
CALCOCO1-217ENST00000549935 CAPN7Q9Y6W3 813 aa14.14□□□□□ -0.15
CALCOCO1-217ENST00000549935 USP17L3A6NCW0 530 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 USP17L4A6NCW7 530 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 HMGB1P1B2RPK0 211 aaPredicted RBP14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 PPP1R37O75864 691 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 MAP2K2P36507 400 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 EIF4A3P38919 411 aaKnown RBP14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 VWA3BQ502W6 1294 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 NAA35Q5VZE5 725 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 CENPPQ6IPU0 288 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 FOXR2Q6PJQ5 311 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 USP17L1Q7RTZ2 530 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 C2CD5Q86YS7 1000 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 WHAMMQ8TF30 809 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 RNPC3Q96LT9 517 aaKnown RBP14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 NLRP3Q96P20 1036 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 NOX5Q96PH1 765 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 RBM12Q9NTZ6 932 aaKnown RBP14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 PCDHA6Q9UN73 950 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 PCDHA8Q9Y5H6 950 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 COL5A3P25940 1745 aaPredicted RBP14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 FLT1P17948 1338 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 ROBO1Q9Y6N7 1651 aa14.13□□□□□ -0.15
CALCOCO1-217ENST00000549935 MAGEA1P43355 309 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 PTGISQ16647 500 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 KLHDC7AQ5VTJ3 777 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 DGKHQ86XP1 1220 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 PIK3R5Q8WYR1 880 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 EEF2KMTQ96G04 330 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 CXorf56Q9H5V9 222 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 MKNK2Q9HBH9 465 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 MAD2L2Q9UI95 211 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 AKR1B10O60218 316 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 SMTNP53814 917 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 PDE4DQ08499 809 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 STK4Q13043 487 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 GRM4Q14833 912 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 SLC35G1Q2M3R5 365 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 SLC10A5Q5PT55 438 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 C12orf60Q5U649 245 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 PPP4R3AQ6IN85 833 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 CNNM4Q6P4Q7 775 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 NBPF5PQ86XG9 351 aaPredicted RBP14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 LRRC15Q8TF66 581 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 ZNF473Q8WTR7 871 aaKnown RBP14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 ANKRD2Q9GZV1 360 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 NDST4Q9H3R1 872 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 CCDC88AQ3V6T2 1871 aa14.12□□□□□ -0.15
CALCOCO1-217ENST00000549935 CYTH3O43739 400 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 FGFR1OPO95684 399 aaKnown RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 FAM107AO95990 144 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 KRT14P02533 472 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 GLI1P08151 1106 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 TSPY3P0CV98 308 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 TSPY8P0CW00 308 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 CHRM1P11229 460 aaPredicted RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 NR1D1P20393 614 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 MDH1P40925 334 aaKnown RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 AMPD3Q01432 767 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 ACTN3Q08043 901 aaPredicted RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 MAN2A1Q16706 1144 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 TTC19Q6DKK2 380 aaPredicted RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 C6orf89Q6UWU4 347 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 SLC44A5Q8NCS7 719 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 SH3RF3Q8TEJ3 882 aaPredicted RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 BAP1Q92560 729 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 SYN2Q92777 582 aaPredicted RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 ATP6V1G3Q96LB4 118 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 CCDC43Q96MW1 224 aaKnown RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 VCPKMTQ9H867 229 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 SRP68Q9UHB9 627 aaKnown RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 MAST2Q6P0Q8 1798 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 CHUKO15111 745 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 GOLGA8HP0CJ92 632 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 MATR3P43243 847 aaKnown RBP eCLIP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 CARSP49589 748 aaKnown RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 LRIG3Q6UXM1 1119 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 SH2D3CQ8N5H7 860 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 SETDB2Q96T68 719 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 HINFPQ9BQA5 517 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 NUCKS1Q9H1E3 243 aaKnown RBP14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 SALL4Q9UJQ4 1053 aa14.11□□□□□ -0.15
CALCOCO1-217ENST00000549935 STXBP3O00186 592 aa14.1□□□□□ -0.15
CALCOCO1-217ENST00000549935 CES2O00748 559 aa14.1□□□□□ -0.15
CALCOCO1-217ENST00000549935 RASSF9O75901 435 aa14.1□□□□□ -0.15
CALCOCO1-217ENST00000549935 PLCG1P19174 1290 aa14.1□□□□□ -0.15
CALCOCO1-217ENST00000549935 CXCR5P32302 372 aa14.1□□□□□ -0.15
CALCOCO1-217ENST00000549935 HSPA9P38646 679 aaKnown RBP14.1□□□□□ -0.15
CALCOCO1-217ENST00000549935 ITGB3BPQ13352 177 aaPredicted RBP14.1□□□□□ -0.15
CALCOCO1-217ENST00000549935 DIXDC1Q155Q3 683 aa14.1□□□□□ -0.15
CALCOCO1-217ENST00000549935 SLC51AQ86UW1 340 aa14.1□□□□□ -0.15
CALCOCO1-217ENST00000549935 CABP7Q86V35 215 aa14.1□□□□□ -0.15
CALCOCO1-217ENST00000549935 NLRP14Q86W24 1093 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms