RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CASP7P55210 303 aa7.1□□□□□ -1.27
CCDC38-208ENST00000549876 INF2Q27J81 1249 aa7.1□□□□□ -1.27
CCDC38-208ENST00000549876 KIAA1211LQ6NV74 962 aa7.1□□□□□ -1.27
CCDC38-208ENST00000549876 STK32CQ86UX6 486 aa7.1□□□□□ -1.27
CCDC38-208ENST00000549876 TXNDC5Q8NBS9 432 aaKnown RBP7.1□□□□□ -1.27
CCDC38-208ENST00000549876 SEC14L1Q92503 715 aa7.1□□□□□ -1.27
CCDC38-208ENST00000549876 SHDQ96IW2 340 aa7.1□□□□□ -1.27
CCDC38-208ENST00000549876 THBDP07204 575 aa7.09□□□□□ -1.27
CCDC38-208ENST00000549876 CYP4F3Q08477 520 aa7.09□□□□□ -1.27
CCDC38-208ENST00000549876 MCTP2Q6DN12 878 aa7.09□□□□□ -1.27
CCDC38-208ENST00000549876 BORAQ6PGQ7 559 aa7.09□□□□□ -1.27
CCDC38-208ENST00000549876 TEX2Q8IWB9 1127 aa7.09□□□□□ -1.27
CCDC38-208ENST00000549876 FAM126BQ8IXS8 530 aa7.09□□□□□ -1.27
CCDC38-208ENST00000549876 C22orf46C9J442 243 aa7.08□□□□□ -1.28
CCDC38-208ENST00000549876 DDX3XO00571 662 aaKnown RBP eCLIP7.08□□□□□ -1.28
CCDC38-208ENST00000549876 FAM124AQ86V42 546 aa7.08□□□□□ -1.28
CCDC38-208ENST00000549876 ZC3H18Q86VM9 953 aaKnown RBP7.08□□□□□ -1.28
CCDC38-208ENST00000549876 SLC16A11Q8NCK7 471 aa7.08□□□□□ -1.28
CCDC38-208ENST00000549876 BVESQ8NE79 360 aa7.08□□□□□ -1.28
CCDC38-208ENST00000549876 DVL3Q92997 716 aaPredicted RBP7.08□□□□□ -1.28
CCDC38-208ENST00000549876 NASPP49321 788 aaPredicted RBP7.07□□□□□ -1.28
CCDC38-208ENST00000549876 PPP2R5EQ16537 467 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 CR1LQ2VPA4 569 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 POMZP3Q6PJE2 187 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 VHLLQ6RSH7 139 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 LIMS2Q7Z4I7 341 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 RIOX2Q8IUF8 465 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 Q8N1Y9 231 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 NPLOC4Q8TAT6 608 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 FRS2Q8WU20 508 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 APBA2Q99767 749 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 ACBD3Q9H3P7 528 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 CYP26B1Q9NR63 512 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 ST6GALNAC2Q9UJ37 374 aa7.07□□□□□ -1.28
CCDC38-208ENST00000549876 C9orf118A6NHY6 69 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 B4GALT3O60512 393 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 ZNF143P52747 638 aaPredicted RBP7.06□□□□□ -1.28
CCDC38-208ENST00000549876 ADAM9Q13443 819 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 CDSNQ15517 529 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 MROH9Q5TGP6 573 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 GTF2IRD2BQ6EKJ0 949 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 MILR1Q7Z6M3 343 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 GTF2IRD2Q86UP8 949 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 TRIM59Q8IWR1 403 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 CRACR2BQ8N4Y2 399 aaPredicted RBP7.06□□□□□ -1.28
CCDC38-208ENST00000549876 CHST13Q8NET6 341 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 LCORQ96JN0 433 aaPredicted RBP7.06□□□□□ -1.28
CCDC38-208ENST00000549876 MRGPRX3Q96LB0 322 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 TGIF2Q9GZN2 237 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 NKX2-4Q9H2Z4 354 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 SRRDQ9UH36 339 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 X6R8D5 127 aa7.06□□□□□ -1.28
CCDC38-208ENST00000549876 ZNF536O15090 1300 aa7.05□□□□□ -1.28
CCDC38-208ENST00000549876 FSHBP01225 129 aa7.05□□□□□ -1.28
CCDC38-208ENST00000549876 ZNF28P17035 718 aa7.05□□□□□ -1.28
CCDC38-208ENST00000549876 FPR2P25090 351 aa7.05□□□□□ -1.28
CCDC38-208ENST00000549876 STAT5AP42229 794 aa7.05□□□□□ -1.28
CCDC38-208ENST00000549876 GLB1LQ6UWU2 654 aa7.05□□□□□ -1.28
CCDC38-208ENST00000549876 FAM169BQ8N8A8 192 aa7.05□□□□□ -1.28
CCDC38-208ENST00000549876 MBD6Q96DN6 1003 aa7.05□□□□□ -1.28
CCDC38-208ENST00000549876 NGRNQ9NPE2 291 aaKnown RBP7.05□□□□□ -1.28
CCDC38-208ENST00000549876 BTG4Q9NY30 223 aa7.05□□□□□ -1.28
CCDC38-208ENST00000549876 PPP4R1LQ9P1A2 415 aa7.05□□□□□ -1.28
CCDC38-208ENST00000549876 ARNTLO00327 626 aa7.04□□□□□ -1.28
CCDC38-208ENST00000549876 IQCEQ6IPM2 695 aa7.04□□□□□ -1.28
CCDC38-208ENST00000549876 NLRP10Q86W26 655 aa7.04□□□□□ -1.28
CCDC38-208ENST00000549876 SEC16BQ96JE7 1060 aa7.04□□□□□ -1.28
CCDC38-208ENST00000549876 SORCS2Q96PQ0 1159 aa7.04□□□□□ -1.28
CCDC38-208ENST00000549876 TSC22D4Q9Y3Q8 395 aa7.04□□□□□ -1.28
CCDC38-208ENST00000549876 LAMTOR5O43504 91 aa7.03□□□□□ -1.28
CCDC38-208ENST00000549876 RPL11P62913 178 aaKnown RBP7.03□□□□□ -1.28
CCDC38-208ENST00000549876 SURF1Q15526 300 aa7.03□□□□□ -1.28
CCDC38-208ENST00000549876 SPRED1Q7Z699 444 aa7.03□□□□□ -1.28
CCDC38-208ENST00000549876 CCDC103Q8IW40 242 aa7.03□□□□□ -1.28
CCDC38-208ENST00000549876 Q8N1X5 172 aa7.03□□□□□ -1.28
CCDC38-208ENST00000549876 LGR4Q9BXB1 951 aa7.03□□□□□ -1.28
CCDC38-208ENST00000549876 TMEFF2Q9UIK5 374 aaPredicted RBP7.03□□□□□ -1.28
CCDC38-208ENST00000549876 TIMM13Q9Y5L4 95 aaPredicted RBP7.03□□□□□ -1.28
CCDC38-208ENST00000549876 NOP56O00567 594 aaKnown RBP7.02□□□□□ -1.29
CCDC38-208ENST00000549876 SUV39H1O43463 412 aa7.02□□□□□ -1.29
CCDC38-208ENST00000549876 C6P13671 934 aa7.02□□□□□ -1.29
CCDC38-208ENST00000549876 NKX3-2P78367 333 aa7.02□□□□□ -1.29
CCDC38-208ENST00000549876 ICAM4Q14773 271 aa7.02□□□□□ -1.29
CCDC38-208ENST00000549876 E4F1Q66K89 784 aaPredicted RBP7.02□□□□□ -1.29
CCDC38-208ENST00000549876 CEP68Q76N32 757 aa7.02□□□□□ -1.29
CCDC38-208ENST00000549876 SH3RF3Q8TEJ3 882 aaPredicted RBP7.02□□□□□ -1.29
CCDC38-208ENST00000549876 YTHDC1Q96MU7 727 aaKnown RBP7.02□□□□□ -1.29
CCDC38-208ENST00000549876 SCAND2PQ9GZW5 306 aaPredicted RBP7.02□□□□□ -1.29
CCDC38-208ENST00000549876 CD248Q9HCU0 757 aa7.02□□□□□ -1.29
CCDC38-208ENST00000549876 ZNF652Q9Y2D9 606 aa7.02□□□□□ -1.29
CCDC38-208ENST00000549876 NAT2P11245 290 aa7.01□□□□□ -1.29
CCDC38-208ENST00000549876 TACR2P21452 398 aa7.01□□□□□ -1.29
CCDC38-208ENST00000549876 BCL6P41182 706 aa7.01□□□□□ -1.29
CCDC38-208ENST00000549876 PKN3Q6P5Z2 889 aa7.01□□□□□ -1.29
CCDC38-208ENST00000549876 PLEKHH3Q7Z736 793 aa7.01□□□□□ -1.29
CCDC38-208ENST00000549876 CPLX3Q8WVH0 158 aa7.01□□□□□ -1.29
CCDC38-208ENST00000549876 INPP5FQ9Y2H2 1132 aa7.01□□□□□ -1.29
CCDC38-208ENST00000549876 GPR42O15529 346 aa7□□□□□ -1.29
CCDC38-208ENST00000549876 IL13P35225 146 aa7□□□□□ -1.29
CCDC38-208ENST00000549876 GTF2A2P52657 109 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms