RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 SAPCD2Q86UD0 394 aa5.98□□□□□ -1.45
SNRPF-202ENST00000549580 SYNPOQ8N3V7 929 aa5.98□□□□□ -1.45
SNRPF-202ENST00000549580 ZCRB1Q8TBF4 217 aaKnown RBP5.98□□□□□ -1.45
SNRPF-202ENST00000549580 DHRS1Q96LJ7 313 aa5.98□□□□□ -1.45
SNRPF-202ENST00000549580 SLKQ9H2G2 1235 aaPredicted RBP5.98□□□□□ -1.45
SNRPF-202ENST00000549580 SPC25Q9HBM1 224 aa5.98□□□□□ -1.45
SNRPF-202ENST00000549580 SUCOQ9UBS9 1254 aaKnown RBP5.98□□□□□ -1.45
SNRPF-202ENST00000549580 IQCA1LA6NCM1 817 aa5.97□□□□□ -1.45
SNRPF-202ENST00000549580 FAM86C2PA6NEL3 165 aa5.97□□□□□ -1.45
SNRPF-202ENST00000549580 PPP1R12AO14974 1030 aaPredicted RBP5.97□□□□□ -1.45
SNRPF-202ENST00000549580 ZNF205O95201 554 aa5.97□□□□□ -1.45
SNRPF-202ENST00000549580 FAM153BP0C7A2 387 aa5.97□□□□□ -1.45
SNRPF-202ENST00000549580 TKFCQ3LXA3 575 aa5.97□□□□□ -1.45
SNRPF-202ENST00000549580 ZC3H12BQ5HYM0 836 aaKnown RBP5.97□□□□□ -1.45
SNRPF-202ENST00000549580 FILIP1Q7Z7B0 1213 aa5.97□□□□□ -1.45
SNRPF-202ENST00000549580 TMEM192Q8IY95 271 aa5.97□□□□□ -1.45
SNRPF-202ENST00000549580 LRRC47Q8N1G4 583 aaKnown RBP5.97□□□□□ -1.45
SNRPF-202ENST00000549580 ZBTB38Q8NAP3 1195 aaPredicted RBP5.97□□□□□ -1.45
SNRPF-202ENST00000549580 ZSWIM2Q8NEG5 633 aa5.97□□□□□ -1.45
SNRPF-202ENST00000549580 SGSM3Q96HU1 749 aa5.97□□□□□ -1.45
SNRPF-202ENST00000549580 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.97□□□□□ -1.45
SNRPF-202ENST00000549580 BCAS3Q9H6U6 928 aa5.97□□□□□ -1.45
SNRPF-202ENST00000549580 NOP58Q9Y2X3 529 aaKnown RBP5.97□□□□□ -1.45
SNRPF-202ENST00000549580 hCG_2014768A0A024R1R8 64 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 DBHP09172 617 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 VAV1P15498 845 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 IGBP1P78318 339 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 NR1I3Q14994 352 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 TCEA2Q15560 299 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 RTP2Q5QGT7 225 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 PPFIBP1Q86W92 1011 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 SLC6A18Q96N87 628 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 PCDH12Q9NPG4 1184 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 COL4A3BPQ9Y5P4 624 aa5.96□□□□□ -1.46
SNRPF-202ENST00000549580 IBSPP21815 317 aaPredicted RBP5.95□□□□□ -1.46
SNRPF-202ENST00000549580 BMP8BP34820 402 aa5.95□□□□□ -1.46
SNRPF-202ENST00000549580 MASP1P48740 699 aa5.95□□□□□ -1.46
SNRPF-202ENST00000549580 PRR5P85299 388 aa5.95□□□□□ -1.46
SNRPF-202ENST00000549580 TARBP2Q15633 366 aaKnown RBP5.95□□□□□ -1.46
SNRPF-202ENST00000549580 SMARCC1Q92922 1105 aaPredicted RBP5.95□□□□□ -1.46
SNRPF-202ENST00000549580 RXFP1Q9HBX9 757 aa5.95□□□□□ -1.46
SNRPF-202ENST00000549580 FBXL21Q9UKT6 434 aa5.95□□□□□ -1.46
SNRPF-202ENST00000549580 CCDC163A0A0D9SF12 145 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 A0A1W2PQ27 194 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 A0A1W2PQ64 194 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 A0A1W2PQC6 194 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 A0A1W2PQD8 194 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 ANKRD34BA5PLL1 514 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 F8W031 263 aaPredicted RBP5.94□□□□□ -1.46
SNRPF-202ENST00000549580 ASMTLO95671 621 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 VIL1P09327 827 aaKnown RBP5.94□□□□□ -1.46
SNRPF-202ENST00000549580 NAT2P11245 290 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 TGM1P22735 817 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 TACR1P25103 407 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 DALRD3Q5D0E6 543 aaKnown RBP5.94□□□□□ -1.46
SNRPF-202ENST00000549580 TAF7LQ5H9L4 462 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 BICRALQ6AI39 1079 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 SPRED1Q7Z699 444 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 CARFQ8N187 725 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 ZNF513Q8N8E2 541 aaPredicted RBP5.94□□□□□ -1.46
SNRPF-202ENST00000549580 LOXL4Q96JB6 756 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 PCED1AQ9H1Q7 454 aa5.94□□□□□ -1.46
SNRPF-202ENST00000549580 A0A1W2PQU0 124 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 C9IYK1 514 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 CLEC3AO75596 197 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 CAPNS1P04632 268 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 GSTM1P09488 218 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 ANKRD39Q53RE8 183 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 AXDND1Q5T1B0 1012 aaPredicted RBP5.93□□□□□ -1.46
SNRPF-202ENST00000549580 PAQR3Q6TCH7 311 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 KISS1RQ969F8 398 aaPredicted RBP5.93□□□□□ -1.46
SNRPF-202ENST00000549580 NOX5Q96PH1 765 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 HAUS7Q99871 368 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 MKRN2Q9H000 416 aaKnown RBP5.93□□□□□ -1.46
SNRPF-202ENST00000549580 KLHL25Q9H0H3 589 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 WDR26Q9H7D7 661 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 PLAAQ9Y263 795 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 FAN1Q9Y2M0 1017 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 CD2APQ9Y5K6 639 aa5.93□□□□□ -1.46
SNRPF-202ENST00000549580 AGRPO00253 132 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 CBFA2T2O43439 604 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 RFPL3O75679 317 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 CYBBP04839 570 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 EPHX1P07099 455 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 ASGR2P07307 311 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 ANAPC15P60006 121 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 AMPD3Q01432 767 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 FOXB2Q5VYV0 432 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 DVL3Q92997 716 aaPredicted RBP5.92□□□□□ -1.46
SNRPF-202ENST00000549580 APBA2Q99767 749 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 ARHGEF4Q9NR80 690 aa5.92□□□□□ -1.46
SNRPF-202ENST00000549580 FZD7O75084 574 aa5.91□□□□□ -1.46
SNRPF-202ENST00000549580 TP53P04637 393 aaPredicted RBP5.91□□□□□ -1.46
SNRPF-202ENST00000549580 GJA9P57773 515 aa5.91□□□□□ -1.46
SNRPF-202ENST00000549580 CDSNQ15517 529 aa5.91□□□□□ -1.46
SNRPF-202ENST00000549580 SV2CQ496J9 727 aa5.91□□□□□ -1.46
SNRPF-202ENST00000549580 TDRD10Q5VZ19 366 aaKnown RBP5.91□□□□□ -1.46
SNRPF-202ENST00000549580 HEATR6Q6AI08 1181 aaKnown RBP5.91□□□□□ -1.46
SNRPF-202ENST00000549580 JAMLQ86YT9 394 aa5.91□□□□□ -1.46
SNRPF-202ENST00000549580 RPUSD2Q8IZ73 545 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms