RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 AFG1LQ8WV93 481 aa18.16■□□□□ 0.5
TCHP-208ENST00000549550 MTUS1Q9ULD2 1270 aa18.16■□□□□ 0.5
TCHP-208ENST00000549550 MICAL3Q7RTP6 2002 aa18.16■□□□□ 0.5
TCHP-208ENST00000549550 WDR19Q8NEZ3 1342 aa18.16■□□□□ 0.5
TCHP-208ENST00000549550 MMP3P08254 477 aa18.15■□□□□ 0.5
TCHP-208ENST00000549550 ZNF543Q08ER8 600 aa18.15■□□□□ 0.5
TCHP-208ENST00000549550 CCDC62Q6P9F0 684 aa18.15■□□□□ 0.5
TCHP-208ENST00000549550 CNKSR3Q6P9H4 555 aa18.15■□□□□ 0.5
TCHP-208ENST00000549550 SESTD1Q86VW0 696 aa18.15■□□□□ 0.5
TCHP-208ENST00000549550 DHX38Q92620 1227 aaKnown RBP18.15■□□□□ 0.5
TCHP-208ENST00000549550 SUGCTQ9HAC7 445 aa18.15■□□□□ 0.5
TCHP-208ENST00000549550 PIEZO1Q92508 2521 aa18.15■□□□□ 0.5
TCHP-208ENST00000549550 PI4K2BG5E9Z4 385 aa18.14■□□□□ 0.49
TCHP-208ENST00000549550 GJB5O95377 273 aa18.14■□□□□ 0.49
TCHP-208ENST00000549550 TCTN1Q2MV58 587 aa18.14■□□□□ 0.49
TCHP-208ENST00000549550 USH1GQ495M9 461 aa18.14■□□□□ 0.49
TCHP-208ENST00000549550 C8orf34Q49A92 452 aa18.14■□□□□ 0.49
TCHP-208ENST00000549550 KAT2BQ92831 832 aa18.14■□□□□ 0.49
TCHP-208ENST00000549550 RAD9AQ99638 391 aa18.14■□□□□ 0.49
TCHP-208ENST00000549550 UBE2ZQ9H832 354 aaPredicted RBP18.14■□□□□ 0.49
TCHP-208ENST00000549550 TCP11L1Q9NUJ3 509 aa18.14■□□□□ 0.49
TCHP-208ENST00000549550 SALL3Q9BXA9 1300 aa18.14■□□□□ 0.49
TCHP-208ENST00000549550 WDFY4Q6ZS81 3184 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 NBNO60934 754 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 PARNO95453 639 aaKnown RBP18.13■□□□□ 0.49
TCHP-208ENST00000549550 GH1P01241 217 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 CXCL10P02778 98 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 CKBP12277 381 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 MX1P20591 662 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 ERVK-21P61565 698 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 ARHGAP1Q07960 439 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 RBL2Q08999 1139 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 ALX1Q15699 326 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 LY6KQ17RY6 165 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 SEPT14Q6ZU15 432 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 CHST3Q7LGC8 479 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 SKAP1Q86WV1 359 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 TGS1Q96RS0 853 aaKnown RBP18.13■□□□□ 0.49
TCHP-208ENST00000549550 NLRC5Q86WI3 1866 aa18.13■□□□□ 0.49
TCHP-208ENST00000549550 ABHD14A-ACY1A0A1B0GW23 586 aa18.12■□□□□ 0.49
TCHP-208ENST00000549550 LINC01553A4QN01 128 aa18.12■□□□□ 0.49
TCHP-208ENST00000549550 RBAK-RBAKDNI3L0D1 243 aa18.12■□□□□ 0.49
TCHP-208ENST00000549550 SNHG28P0DPA3 235 aa18.12■□□□□ 0.49
TCHP-208ENST00000549550 CASTP20810 708 aaKnown RBP18.12■□□□□ 0.49
TCHP-208ENST00000549550 TTC22Q5TAA0 569 aa18.12■□□□□ 0.49
TCHP-208ENST00000549550 GTF2IRD1Q9UHL9 959 aa18.12■□□□□ 0.49
TCHP-208ENST00000549550 C5orf42Q9H799 3197 aa18.11■□□□□ 0.49
TCHP-208ENST00000549550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.11■□□□□ 0.49
TCHP-208ENST00000549550 FGAP02671 866 aa18.11■□□□□ 0.49
TCHP-208ENST00000549550 PDE1AP54750 535 aa18.11■□□□□ 0.49
TCHP-208ENST00000549550 FAM117BQ6P1L5 589 aa18.11■□□□□ 0.49
TCHP-208ENST00000549550 C7orf31Q8N865 590 aa18.11■□□□□ 0.49
TCHP-208ENST00000549550 RGS22Q8NE09 1264 aa18.11■□□□□ 0.49
TCHP-208ENST00000549550 HDAC6Q9UBN7 1215 aa18.11■□□□□ 0.49
TCHP-208ENST00000549550 TRIOO75962 3097 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 LAMA4Q16363 1823 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 GOLGA8HP0CJ92 632 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 KCNA5P22460 613 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 IKBKEQ14164 716 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 DGKDQ16760 1214 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 LEXMQ3ZCV2 418 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 FAM178BQ8IXR5 827 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 TBC1D5Q92609 795 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 TTC14Q96N46 770 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 TAAR1Q96RJ0 339 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 ALG1Q9BT22 464 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 CPVLQ9H3G5 476 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 UPF2Q9HAU5 1272 aaKnown RBP18.1■□□□□ 0.49
TCHP-208ENST00000549550 HELLSQ9NRZ9 838 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 COL20A1Q9P218 1284 aa18.1■□□□□ 0.49
TCHP-208ENST00000549550 RBM19Q9Y4C8 960 aaKnown RBP18.1■□□□□ 0.49
TCHP-208ENST00000549550 EFCAB14O75071 495 aa18.09■□□□□ 0.49
TCHP-208ENST00000549550 PSEN2P49810 448 aa18.09■□□□□ 0.49
TCHP-208ENST00000549550 HAND2P61296 217 aa18.09■□□□□ 0.49
TCHP-208ENST00000549550 STXBP2Q15833 593 aa18.09■□□□□ 0.49
TCHP-208ENST00000549550 GPATCH4Q5T3I0 446 aaKnown RBP18.09■□□□□ 0.49
TCHP-208ENST00000549550 GJD3Q8N144 294 aa18.09■□□□□ 0.49
TCHP-208ENST00000549550 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.09■□□□□ 0.49
TCHP-208ENST00000549550 SYTL5Q8TDW5 730 aaPredicted RBP18.09■□□□□ 0.49
TCHP-208ENST00000549550 NSUN6Q8TEA1 469 aaKnown RBP18.09■□□□□ 0.49
TCHP-208ENST00000549550 EVI5LQ96CN4 794 aa18.09■□□□□ 0.49
TCHP-208ENST00000549550 ATG2AQ2TAZ0 1938 aa18.08■□□□□ 0.49
TCHP-208ENST00000549550 PRR33A8MZF0 331 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 ZNF286BP0CG31 522 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 IL9P15248 144 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 PTK7Q13308 1070 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 MBTPS1Q14703 1052 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 MFSD10Q14728 455 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 CDC37Q16543 378 aaPredicted RBP18.08■□□□□ 0.48
TCHP-208ENST00000549550 TRIM71Q2Q1W2 868 aaKnown RBP18.08■□□□□ 0.48
TCHP-208ENST00000549550 ZNF618Q5T7W0 954 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 TRAF7Q6Q0C0 670 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 FBXO22Q8NEZ5 403 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 WNT8BQ93098 351 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 FAM227BQ96M60 508 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 IWS1Q96ST2 819 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 RMDN3Q96TC7 470 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 C17orf80Q9BSJ5 609 aa18.08■□□□□ 0.48
TCHP-208ENST00000549550 KATNAL1Q9BW62 490 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms