RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 STAG2Q8N3U4 1231 aa12.91□□□□□ -0.34
VDR-206ENST00000549336 MCPH1Q8NEM0 835 aa12.91□□□□□ -0.34
VDR-206ENST00000549336 INO80BQ9C086 356 aaPredicted RBP12.91□□□□□ -0.34
VDR-206ENST00000549336 MANSC4A6NHS7 340 aaPredicted RBP12.91□□□□□ -0.34
VDR-206ENST00000549336 ATF7P17544 494 aaPredicted RBP12.91□□□□□ -0.34
VDR-206ENST00000549336 HSP90B2PQ58FF3 399 aa12.91□□□□□ -0.34
VDR-206ENST00000549336 SRBD1Q8N5C6 995 aaKnown RBP12.91□□□□□ -0.34
VDR-206ENST00000549336 CLIC6Q96NY7 704 aa12.91□□□□□ -0.34
VDR-206ENST00000549336 SYNPO2Q9UMS6 1093 aa12.91□□□□□ -0.34
VDR-206ENST00000549336 TMX2Q9Y320 296 aa12.91□□□□□ -0.34
VDR-206ENST00000549336 NFE2L3Q9Y4A8 694 aa12.91□□□□□ -0.34
VDR-206ENST00000549336 PPP2R3AQ06190 1150 aa12.91□□□□□ -0.34
VDR-206ENST00000549336 MAP3K20Q9NYL2 800 aaKnown RBP12.91□□□□□ -0.34
VDR-206ENST00000549336 CD2BP2O95400 341 aaKnown RBP12.9□□□□□ -0.34
VDR-206ENST00000549336 RPN1P04843 607 aaKnown RBP12.9□□□□□ -0.34
VDR-206ENST00000549336 TNNI1P19237 187 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 CTNNA2P26232 953 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 PRELPP51888 382 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 TMEM206Q9H813 350 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 LRRC37A3O60309 1634 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 MAFGO15525 162 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 BCRP11274 1271 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 MAP1SQ66K74 1059 aaPredicted RBP12.9□□□□□ -0.34
VDR-206ENST00000549336 KIF18AQ8NI77 898 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 GMCL1Q96IK5 515 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 IFNKQ9P0W0 207 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 TCRBV5S4A2TA0A5A2 114 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 XRCC5P13010 732 aaKnown RBP12.9□□□□□ -0.34
VDR-206ENST00000549336 CEP55Q53EZ4 464 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 ARMCX5Q6P1M9 558 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 PROM2Q8N271 834 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 ZKSCAN4Q969J2 545 aaPredicted RBP12.9□□□□□ -0.34
VDR-206ENST00000549336 NUCKS1Q9H1E3 243 aaKnown RBP12.9□□□□□ -0.34
VDR-206ENST00000549336 ARMCX3Q9UH62 379 aaPredicted RBP12.9□□□□□ -0.34
VDR-206ENST00000549336 DDTLA6NHG4 134 aaPredicted RBP12.9□□□□□ -0.34
VDR-206ENST00000549336 PRPF6O94906 941 aaKnown RBP12.9□□□□□ -0.34
VDR-206ENST00000549336 TNNC2P02585 160 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 RAPGEF1Q13905 1077 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 TTBK2Q6IQ55 1244 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 SMC1BQ8NDV3 1235 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 FAM193BQ96PV7 902 aaPredicted RBP12.9□□□□□ -0.34
VDR-206ENST00000549336 PCDHB6Q9Y5E3 794 aa12.9□□□□□ -0.34
VDR-206ENST00000549336 TMCO5BA8MYB1 307 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 FKBP1BP68106 108 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 PSMD2Q13200 908 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 SPOUT1Q5T280 376 aaKnown RBP12.89□□□□□ -0.35
VDR-206ENST00000549336 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
VDR-206ENST00000549336 GMCL1P1Q8NEA9 526 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 NUDT12Q9BQG2 462 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 KMT5AQ9NQR1 393 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
VDR-206ENST00000549336 ESYT2A0FGR8 921 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 INO80B-WBP1J3KQ70 363 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 HNRNPDLO14979 420 aaKnown RBP12.89□□□□□ -0.35
VDR-206ENST00000549336 GADD45BO75293 160 aaPredicted RBP12.89□□□□□ -0.35
VDR-206ENST00000549336 ZSCAN20P17040 1043 aaPredicted RBP12.89□□□□□ -0.35
VDR-206ENST00000549336 ABI1Q8IZP0 508 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 IPO5O00410 1097 aaKnown RBP12.89□□□□□ -0.35
VDR-206ENST00000549336 ERLIN1O75477 346 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 PNOCQ13519 176 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 MTERF2Q49AM1 385 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 KIAA1683Q9H0B3 1180 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 MROH8Q9H579 483 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 CHGBP05060 677 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 INHBEP58166 350 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 BAATQ14032 418 aaPredicted RBP12.89□□□□□ -0.35
VDR-206ENST00000549336 ACCSQ96QU6 501 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 RPS6KC1Q96S38 1066 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 PARVGQ9HBI0 331 aa12.89□□□□□ -0.35
VDR-206ENST00000549336 P4HBP07237 508 aaKnown RBP12.88□□□□□ -0.35
VDR-206ENST00000549336 NDUFA8P51970 172 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 FCGRTP55899 365 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 RGS22Q8NE09 1264 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 ARHGEF37A1IGU5 675 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 GLTPD2A6NH11 291 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 STAM2O75886 525 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 PTPREP23469 700 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 PPATQ06203 517 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 KIF5AQ12840 1032 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 PLA2G4BP0C869 781 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 KRT5P13647 590 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 INPP5BP32019 993 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 ANTXR2P58335 489 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 DPH6Q7L8W6 267 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 DISC1Q9NRI5 854 aa12.88□□□□□ -0.35
VDR-206ENST00000549336 ESPNB1AK53 854 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 TBX3O15119 743 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 KRT86O43790 486 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 TUBB4AP04350 444 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 MYL3P08590 195 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 CLEC10AQ8IUN9 316 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 SRRTQ9BXP5 876 aaKnown RBP12.87□□□□□ -0.35
VDR-206ENST00000549336 VPS16Q9H269 839 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 ALS2Q96Q42 1657 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 KRT19P08727 400 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 CASQ1P31415 396 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 ACTN2P35609 894 aa12.87□□□□□ -0.35
VDR-206ENST00000549336 QARSP47897 775 aaKnown RBP12.87□□□□□ -0.35
VDR-206ENST00000549336 ARID5AQ03989 594 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms