RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 SLFNL1Q499Z3 407 aa16.64■□□□□ 0.25
PTCH1-217ENST00000548420 MCTP2Q6DN12 878 aa16.64■□□□□ 0.25
PTCH1-217ENST00000548420 TRAF7Q6Q0C0 670 aa16.64■□□□□ 0.25
PTCH1-217ENST00000548420 PCDHGC5Q9Y5F6 944 aa16.64■□□□□ 0.25
PTCH1-217ENST00000548420 OTOGLQ3ZCN5 2332 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 FAM208BQ5VWN6 2430 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 CHGBP05060 677 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 MX1P20591 662 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 IKBKEQ14164 716 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 ZSCAN25Q6NSZ9 544 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 KIAA1211Q6ZU35 1233 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 SMRP1Q8NCR6 262 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 CHST13Q8NET6 341 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 RPGRIP1Q96KN7 1286 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 INCENPQ9NQS7 918 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 MCM9Q9NXL9 1143 aa16.63■□□□□ 0.25
PTCH1-217ENST00000548420 LCTP09848 1927 aa16.62■□□□□ 0.25
PTCH1-217ENST00000548420 ASB14A6NK59 587 aa16.62■□□□□ 0.25
PTCH1-217ENST00000548420 RAD21O60216 631 aa16.62■□□□□ 0.25
PTCH1-217ENST00000548420 PTGISQ16647 500 aa16.62■□□□□ 0.25
PTCH1-217ENST00000548420 DUSP28Q4G0W2 176 aa16.62■□□□□ 0.25
PTCH1-217ENST00000548420 LCORLQ8N3X6 602 aa16.62■□□□□ 0.25
PTCH1-217ENST00000548420 CAGE1Q8TC20 777 aa16.62■□□□□ 0.25
PTCH1-217ENST00000548420 CRNKL1Q9BZJ0 848 aaKnown RBP16.62■□□□□ 0.25
PTCH1-217ENST00000548420 A1CFQ9NQ94 594 aaKnown RBP16.62■□□□□ 0.25
PTCH1-217ENST00000548420 HOMER2Q9NSB8 354 aa16.62■□□□□ 0.25
PTCH1-217ENST00000548420 RALGAPA2Q2PPJ7 1873 aa16.62■□□□□ 0.25
PTCH1-217ENST00000548420 MYO10Q9HD67 2058 aa16.61■□□□□ 0.25
PTCH1-217ENST00000548420 LINC00271P0C7V0 271 aa16.61■□□□□ 0.25
PTCH1-217ENST00000548420 PTPN11Q06124 597 aaPredicted RBP16.61■□□□□ 0.25
PTCH1-217ENST00000548420 GDF6Q6KF10 455 aaPredicted RBP16.61■□□□□ 0.25
PTCH1-217ENST00000548420 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
PTCH1-217ENST00000548420 PURBQ96QR8 312 aaKnown RBP16.61■□□□□ 0.25
PTCH1-217ENST00000548420 PUS7LQ9H0K6 701 aaKnown RBP16.61■□□□□ 0.25
PTCH1-217ENST00000548420 SLC38A10Q9HBR0 1119 aa16.61■□□□□ 0.25
PTCH1-217ENST00000548420 DCP1AQ9NPI6 582 aaPredicted RBP16.61■□□□□ 0.25
PTCH1-217ENST00000548420 NOD1Q9Y239 953 aa16.61■□□□□ 0.25
PTCH1-217ENST00000548420 USP15Q9Y4E8 981 aaPredicted RBP16.61■□□□□ 0.25
PTCH1-217ENST00000548420 MYH7P12883 1935 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 EFCAB14O75071 495 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 MBD4O95243 580 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 CKBP12277 381 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 PDE1AP54750 535 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 NUCB1Q02818 461 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 RBL2Q08999 1139 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 CAMK1Q14012 370 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 PRPF38AQ8NAV1 312 aaKnown RBP16.6■□□□□ 0.25
PTCH1-217ENST00000548420 PHF7Q9BWX1 381 aaPredicted RBP16.6■□□□□ 0.25
PTCH1-217ENST00000548420 ARMT1Q9H993 441 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 GOPCQ9HD26 462 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 ATP8A2Q9NTI2 1148 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 ZBTB47Q9UFB7 747 aaPredicted RBP16.6■□□□□ 0.25
PTCH1-217ENST00000548420 FBXO40Q9UH90 709 aa16.6■□□□□ 0.25
PTCH1-217ENST00000548420 RNF113AO15541 343 aaKnown RBP16.59■□□□□ 0.25
PTCH1-217ENST00000548420 CSPG5O95196 566 aa16.59■□□□□ 0.25
PTCH1-217ENST00000548420 ZFYP08048 801 aaPredicted RBP16.59■□□□□ 0.25
PTCH1-217ENST00000548420 NDUFV1P49821 464 aa16.59■□□□□ 0.25
PTCH1-217ENST00000548420 COASYQ13057 564 aa16.59■□□□□ 0.25
PTCH1-217ENST00000548420 SDR42E1Q8WUS8 393 aa16.59■□□□□ 0.25
PTCH1-217ENST00000548420 WNT8BQ93098 351 aa16.59■□□□□ 0.25
PTCH1-217ENST00000548420 OSBP2Q969R2 916 aa16.59■□□□□ 0.25
PTCH1-217ENST00000548420 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTCH1-217ENST00000548420 GPR179Q6PRD1 2367 aa16.58■□□□□ 0.25
PTCH1-217ENST00000548420 USP17L12C9JPN9 530 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 USP17L21D6R901 530 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 PRKAB2O43741 272 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 ZBED4O75132 1171 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 CPT1AP50416 773 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 CHD1LQ86WJ1 897 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 MORC4Q8TE76 937 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 APPBP2Q92624 585 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 STRBPQ96SI9 672 aaKnown RBP16.58■□□□□ 0.24
PTCH1-217ENST00000548420 WDR11Q9BZH6 1224 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 SMOC2Q9H3U7 446 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 GPHNQ9NQX3 736 aaPredicted RBP16.58■□□□□ 0.24
PTCH1-217ENST00000548420 SWAP70Q9UH65 585 aa16.58■□□□□ 0.24
PTCH1-217ENST00000548420 SETXQ7Z333 2677 aaKnown RBP16.58■□□□□ 0.24
PTCH1-217ENST00000548420 C5orf67F2Z3F1 127 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 GLP2RO95838 553 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 AMHP03971 560 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 IRX6P78412 446 aaPredicted RBP16.57■□□□□ 0.24
PTCH1-217ENST00000548420 ACAP1Q15027 740 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 TRIM71Q2Q1W2 868 aaKnown RBP16.57■□□□□ 0.24
PTCH1-217ENST00000548420 ADGRD2Q7Z7M1 963 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 TICAM2Q86XR7 235 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 CCDC155Q8N6L0 562 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 DBF4BQ8NFT6 615 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 OR6J1Q8NGC5 347 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 COPS5Q92905 334 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 KIFC2Q96AC6 838 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 OSBPL3Q9H4L5 887 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 KANSL2Q9H9L4 492 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 VTA1Q9NP79 307 aa16.57■□□□□ 0.24
PTCH1-217ENST00000548420 CYP2D7A0A087X1C5 515 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 PARNO95453 639 aaKnown RBP16.56■□□□□ 0.24
PTCH1-217ENST00000548420 NDUFB10O96000 172 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 CDK8P49336 464 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 CHMP4BP1P59074 171 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 RSPO4Q2I0M5 234 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms