RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 MYADML2A6NDP7 307 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 B4DLN1 442 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 STXBP3O00186 592 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 CPLX1O14810 134 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 DTNBO60941 627 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 DUSP11O75319 330 aaKnown RBP10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 NR3C2P08235 984 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 MYCLP12524 364 aaPredicted RBP10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 CAPN2P17655 700 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 MRPL12P52815 198 aaKnown RBP10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 NAPAP54920 295 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 AKAP17AQ02040 695 aaKnown RBP10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 SCRN1Q12765 414 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 PWP2Q15269 919 aaKnown RBP10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 ANKRD1Q15327 319 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 PKN1Q16512 942 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 UBE2SQ16763 222 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 SEPT14Q6ZU15 432 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 SAMD3Q8N6K7 520 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 ARRDC4Q8NCT1 418 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 IL31RAQ8NI17 732 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 PDCD2LQ9BRP1 358 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 ALDH8A1Q9H2A2 487 aaPredicted RBP10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 SLKQ9H2G2 1235 aaPredicted RBP10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 MAP3K20Q9NYL2 800 aaKnown RBP10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 SYNRGQ9UMZ2 1314 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 CENPFP49454 3210 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 MCM3APO60318 1980 aa10.23□□□□□ -0.77
SMARCC2-205ENST00000548130 RBBP6Q7Z6E9 1792 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 KBTBD13C9JR72 458 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 DNM1LO00429 736 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 MEIS2O14770 477 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 DYNC1LI2O43237 492 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 PRPF3O43395 683 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 ADAMTS4O75173 837 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 LARGE1O95461 756 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 C6orf222P0C671 652 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 SCG2P13521 617 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 HOXB1P14653 301 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 IFNAR1P17181 557 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 PGM5Q15124 567 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 STXBP2Q15833 593 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 PFKFB3Q16875 520 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 IQSEC1Q6DN90 963 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 RNF180Q86T96 592 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 NECAB1Q8N987 351 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 DPF3Q92784 378 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 COPS5Q92905 334 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 FERMT2Q96AC1 680 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 IWS1Q96ST2 819 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 KIF2CQ99661 725 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 RNF26Q9BY78 433 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 WDR11Q9BZH6 1224 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 SENP6Q9GZR1 1112 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 BARHL2Q9NY43 387 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 GNEQ9Y223 722 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 LCTP09848 1927 aa10.22□□□□□ -0.77
SMARCC2-205ENST00000548130 RBM47A0AV96 593 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 SMCO2A6NFE2 343 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 PIK3CDO00329 1044 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 CTAGE5O15320 804 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 PFKFB2O60825 505 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 ARIH2O95376 493 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 COL6A1P12109 1028 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 RBM25P49756 843 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 ADCY7P51828 1080 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 GJA9P57773 515 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 BEX3Q00994 111 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 SSRP1Q08945 709 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 ME3Q16798 604 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 DUSP28Q4G0W2 176 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 CPLX2Q6PUV4 134 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 TLK2Q86UE8 772 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 VSIG10LQ86VR7 867 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 KLHDC9Q8NEP7 349 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 SCFD2Q8WU76 684 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 PGBD1Q96JS3 809 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 HTATIP2Q9BUP3 242 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 UPF3AQ9H1J1 476 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 UPF2Q9HAU5 1272 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 SPC25Q9HBM1 224 aa10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-205ENST00000548130 MYH6P13533 1939 aa10.21□□□□□ -0.78
SMARCC2-205ENST00000548130 hCG_1984214I3L0E3 225 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 ADAMTS3O15072 1205 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 EIF3JO75822 258 aaKnown RBP10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 TXNP10599 105 aaKnown RBP10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 CCND2P30279 289 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 TTLL4Q14679 1199 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 KCNA10Q16322 511 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 LRRC26Q2I0M4 334 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 GNASQ5JWF2 1037 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 PDE4DIPQ5VU43 2346 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 CCSAPQ6IQ19 270 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 TRIM22Q8IYM9 498 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 ZNF713Q8N859 430 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 OR6J1Q8NGC5 347 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 AP5M1Q9H0R1 490 aa10.2□□□□□ -0.78
SMARCC2-205ENST00000548130 RIC8AQ9NPQ8 531 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms