RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 ITGA7Q13683 1181 aa16.72■□□□□ 0.27
SEC23A-204ENST00000548032 PGM5Q15124 567 aa16.72■□□□□ 0.27
SEC23A-204ENST00000548032 Q6ZUG5 572 aa16.72■□□□□ 0.27
SEC23A-204ENST00000548032 HEATR3Q7Z4Q2 680 aa16.72■□□□□ 0.27
SEC23A-204ENST00000548032 SMARCC2Q8TAQ2 1214 aa16.72■□□□□ 0.27
SEC23A-204ENST00000548032 POLR3EQ9NVU0 708 aa16.72■□□□□ 0.27
SEC23A-204ENST00000548032 MRVI1Q9Y6F6 885 aa16.72■□□□□ 0.27
SEC23A-204ENST00000548032 KIAA0355O15063 1070 aa16.71■□□□□ 0.27
SEC23A-204ENST00000548032 TLR3O15455 904 aaKnown RBP16.71■□□□□ 0.27
SEC23A-204ENST00000548032 GH1P01241 217 aa16.71■□□□□ 0.27
SEC23A-204ENST00000548032 CASTP20810 708 aaKnown RBP16.71■□□□□ 0.27
SEC23A-204ENST00000548032 ITGB8P26012 769 aa16.71■□□□□ 0.27
SEC23A-204ENST00000548032 PSMA5P28066 241 aa16.71■□□□□ 0.27
SEC23A-204ENST00000548032 CCND2P30279 289 aa16.71■□□□□ 0.27
SEC23A-204ENST00000548032 APOBRQ0VD83 1088 aa16.71■□□□□ 0.27
SEC23A-204ENST00000548032 CCDC62Q6P9F0 684 aa16.71■□□□□ 0.27
SEC23A-204ENST00000548032 USP17L6PQ6QN14 398 aa16.71■□□□□ 0.27
SEC23A-204ENST00000548032 DEFB123Q8N688 67 aa16.71■□□□□ 0.27
SEC23A-204ENST00000548032 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
SEC23A-204ENST00000548032 BRF1Q92994 677 aa16.71■□□□□ 0.27
SEC23A-204ENST00000548032 SORBS3O60504 671 aa16.7■□□□□ 0.26
SEC23A-204ENST00000548032 RPS6KB1P23443 525 aa16.7■□□□□ 0.26
SEC23A-204ENST00000548032 CHMP4BP1P59074 171 aa16.7■□□□□ 0.26
SEC23A-204ENST00000548032 PURAQ00577 322 aaKnown RBP16.7■□□□□ 0.26
SEC23A-204ENST00000548032 Q7L0L9 218 aa16.7■□□□□ 0.26
SEC23A-204ENST00000548032 VSIG10LQ86VR7 867 aa16.7■□□□□ 0.26
SEC23A-204ENST00000548032 FAM126BQ8IXS8 530 aa16.7■□□□□ 0.26
SEC23A-204ENST00000548032 AFG1LQ8WV93 481 aa16.7■□□□□ 0.26
SEC23A-204ENST00000548032 MTG1Q9BT17 334 aaPredicted RBP16.7■□□□□ 0.26
SEC23A-204ENST00000548032 PSTPIP2Q9H939 334 aa16.7■□□□□ 0.26
SEC23A-204ENST00000548032 DDX41Q9UJV9 622 aaKnown RBP16.7■□□□□ 0.26
SEC23A-204ENST00000548032 GRIN2DO15399 1336 aa16.7■□□□□ 0.26
SEC23A-204ENST00000548032 CNTNAP5Q8WYK1 1306 aa16.7■□□□□ 0.26
SEC23A-204ENST00000548032 A6NJR5 290 aa16.69■□□□□ 0.26
SEC23A-204ENST00000548032 KCNA4P22459 653 aa16.69■□□□□ 0.26
SEC23A-204ENST00000548032 METAP2P50579 478 aaKnown RBP eCLIP16.69■□□□□ 0.26
SEC23A-204ENST00000548032 ARHGAP1Q07960 439 aa16.69■□□□□ 0.26
SEC23A-204ENST00000548032 SLC43A3Q8NBI5 491 aa16.69■□□□□ 0.26
SEC23A-204ENST00000548032 PPP1R13LQ8WUF5 828 aa16.69■□□□□ 0.26
SEC23A-204ENST00000548032 USP26Q9BXU7 913 aa16.69■□□□□ 0.26
SEC23A-204ENST00000548032 TBX21Q9UL17 535 aa16.69■□□□□ 0.26
SEC23A-204ENST00000548032 V9GY48 417 aaPredicted RBP16.69■□□□□ 0.26
SEC23A-204ENST00000548032 MEIS2O14770 477 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 KPNA6O60684 536 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 RGS20O76081 388 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 MMP3P08254 477 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 CDC27P30260 824 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 UBE2SQ16763 222 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 FAM47CQ5HY64 1035 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 DHX37Q8IY37 1157 aaKnown RBP16.68■□□□□ 0.26
SEC23A-204ENST00000548032 PPP1R12CQ9BZL4 782 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 FAM217BQ9NTX9 383 aaPredicted RBP16.68■□□□□ 0.26
SEC23A-204ENST00000548032 RTEL1Q9NZ71 1219 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 COL6A3P12111 3177 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 A0A0C4DFX4 3053 aa16.68■□□□□ 0.26
SEC23A-204ENST00000548032 PIK3CDO00329 1044 aa16.67■□□□□ 0.26
SEC23A-204ENST00000548032 EPB41L2O43491 1005 aaKnown RBP16.67■□□□□ 0.26
SEC23A-204ENST00000548032 TIMP1P01033 207 aa16.67■□□□□ 0.26
SEC23A-204ENST00000548032 CD4P01730 458 aa16.67■□□□□ 0.26
SEC23A-204ENST00000548032 ADD1P35611 737 aaKnown RBP16.67■□□□□ 0.26
SEC23A-204ENST00000548032 RCAN1P53805 252 aa16.67■□□□□ 0.26
SEC23A-204ENST00000548032 NAPAP54920 295 aa16.67■□□□□ 0.26
SEC23A-204ENST00000548032 FPGSQ05932 587 aa16.67■□□□□ 0.26
SEC23A-204ENST00000548032 FUT2Q10981 343 aa16.67■□□□□ 0.26
SEC23A-204ENST00000548032 WWC2Q6AWC2 1192 aa16.67■□□□□ 0.26
SEC23A-204ENST00000548032 CCDC196A0A1B0GTZ2 297 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 DLL1O00548 723 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 B4GALT4O60513 344 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 GGPS1O95749 300 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 MRPS9P82933 396 aaKnown RBP16.66■□□□□ 0.26
SEC23A-204ENST00000548032 LAMC2Q13753 1193 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 SHHQ15465 462 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 NBPF20Q3BBV1 942 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 GNPTABQ3T906 1256 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 C9orf50Q5SZB4 431 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 KCNV1Q6PIU1 500 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 RUFY3Q7L099 469 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 SEZ6LQ9BYH1 1024 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
SEC23A-204ENST00000548032 MTMR10Q9NXD2 777 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 CYP46A1Q9Y6A2 500 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 CUL9Q8IWT3 2517 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 FRMPD4Q14CM0 1322 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 LTBP2Q14767 1821 aa16.66■□□□□ 0.26
SEC23A-204ENST00000548032 SPDYE3A6NKU9 549 aa16.65■□□□□ 0.26
SEC23A-204ENST00000548032 UBA1P22314 1058 aaKnown RBP16.65■□□□□ 0.26
SEC23A-204ENST00000548032 CYP2C18P33260 490 aa16.65■□□□□ 0.26
SEC23A-204ENST00000548032 EPHB4P54760 987 aa16.65■□□□□ 0.26
SEC23A-204ENST00000548032 SP2Q02086 613 aa16.65■□□□□ 0.26
SEC23A-204ENST00000548032 DGKDQ16760 1214 aa16.65■□□□□ 0.26
SEC23A-204ENST00000548032 CELF3Q5SZQ8 465 aaKnown RBP16.65■□□□□ 0.26
SEC23A-204ENST00000548032 EMID1Q96A84 441 aaPredicted RBP16.65■□□□□ 0.26
SEC23A-204ENST00000548032 SPATA33Q96N06 139 aa16.65■□□□□ 0.26
SEC23A-204ENST00000548032 UPF3BQ9BZI7 483 aaKnown RBP16.65■□□□□ 0.26
SEC23A-204ENST00000548032 HIPK3Q9H422 1215 aa16.65■□□□□ 0.26
SEC23A-204ENST00000548032 MLXIPQ9HAP2 919 aa16.65■□□□□ 0.26
SEC23A-204ENST00000548032 ZSWIM6Q9HCJ5 1215 aa16.65■□□□□ 0.26
SEC23A-204ENST00000548032 TRMT13Q9NUP7 481 aaKnown RBP16.65■□□□□ 0.26
SEC23A-204ENST00000548032 STXBP5LQ9Y2K9 1186 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms