RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SEMA6BQ9H3T3 888 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 JMJD4Q9H9V9 463 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 RABGEF1Q9UJ41 708 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 STXBP5LQ9Y2K9 1186 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 ABCB11O95342 1321 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 WDR19Q8NEZ3 1342 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 LOC102724159A0A0B4J2E5 919 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 RBM47A0AV96 593 aaKnown RBP7.81□□□□□ -1.16
SCAF11-211ENST00000547950 KLRF2D3W0D1 207 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 IFIT3O14879 490 aaKnown RBP7.81□□□□□ -1.16
SCAF11-211ENST00000547950 CFBP00751 764 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 CD4P01730 458 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 CPT1AP50416 773 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 CCL23P55773 120 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 PPIGQ13427 754 aaKnown RBP eCLIP7.81□□□□□ -1.16
SCAF11-211ENST00000547950 PPP2R5BQ15173 497 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 PWP2Q15269 919 aaKnown RBP7.81□□□□□ -1.16
SCAF11-211ENST00000547950 SEPT14Q6ZU15 432 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 ZNF365Q70YC5 407 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 C16orf59Q7L2K0 433 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 CHST3Q7LGC8 479 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 SLC43A3Q8NBI5 491 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 RGS22Q8NE09 1264 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 DNERQ8NFT8 737 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 NSUN6Q8TEA1 469 aaKnown RBP7.81□□□□□ -1.16
SCAF11-211ENST00000547950 SCFD2Q8WU76 684 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 PPP1R13LQ8WUF5 828 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 COPS5Q92905 334 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 GUCD1Q96NT3 240 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 RMDN3Q96TC7 470 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 CDX2Q99626 313 aaPredicted RBP7.81□□□□□ -1.16
SCAF11-211ENST00000547950 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.81□□□□□ -1.161e-6■□□□□ 8.2
SCAF11-211ENST00000547950 HIPK3Q9H422 1215 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 RTN4Q9NQC3 1192 aaKnown RBP7.81□□□□□ -1.16
SCAF11-211ENST00000547950 POLR3EQ9NVU0 708 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 KIAA1468Q9P260 1216 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 MRPL11Q9Y3B7 192 aaKnown RBP7.81□□□□□ -1.16
SCAF11-211ENST00000547950 ALPK3Q96L96 1907 aa7.81□□□□□ -1.16
SCAF11-211ENST00000547950 UMODL1Q5DID0 1318 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 MYH8P13535 1937 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 ERICH2A1L162 156 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 E7EWF7 191 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 DLL1O00548 723 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 SGSM2O43147 1006 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 B4GALT4O60513 344 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 CYP21A2P08686 494 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 EIF2AK2P19525 551 aaKnown RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 EDNRBP24530 442 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 PURAQ00577 322 aaKnown RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 TTLL4Q14679 1199 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 SEC23AQ15436 765 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 STXBP2Q15833 593 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 LY6KQ17RY6 165 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 BRDTQ58F21 947 aaPredicted RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 FAM47CQ5HY64 1035 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 TMEM240Q5SV17 173 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 ARHGEF16Q5VV41 709 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 RALYLQ86SE5 291 aaKnown RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 HOMER1Q86YM7 354 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 ANKK1Q8NFD2 765 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 SYTL5Q8TDW5 730 aaPredicted RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 PIBF1Q8WXW3 757 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 MTG1Q9BT17 334 aaPredicted RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 AMNQ9BXJ7 453 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 SEZ6LQ9BYH1 1024 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 ALDH8A1Q9H2A2 487 aaPredicted RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 TTYH1Q9H313 450 aaPredicted RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 SENP2Q9HC62 589 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 TRMT13Q9NUP7 481 aaKnown RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 COL20A1Q9P218 1284 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 MAD2L2Q9UI95 211 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 PCDHA1Q9Y5I3 950 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 TAF6LQ9Y6J9 622 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 COL11A1P12107 1806 aaPredicted RBP7.8□□□□□ -1.16
SCAF11-211ENST00000547950 DNAH12Q6ZR08 3092 aa7.8□□□□□ -1.16
SCAF11-211ENST00000547950 RAD50Q92878 1312 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 PALM3A6NDB9 673 aaPredicted RBP7.79□□□□□ -1.16
SCAF11-211ENST00000547950 A6NJR5 290 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 GRXCR1A8MXD5 290 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 NKRFO15226 690 aaKnown RBP eCLIP7.79□□□□□ -1.16
SCAF11-211ENST00000547950 KPNA6O60684 536 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 PPP1R11O60927 126 aaPredicted RBP7.79□□□□□ -1.16
SCAF11-211ENST00000547950 ARIH2O95376 493 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 FGBP02675 491 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 SUPT20HL2P0C7V6 817 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 CYP2C9P11712 490 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 MYCLP12524 364 aaPredicted RBP7.79□□□□□ -1.16
SCAF11-211ENST00000547950 WTAPQ15007 396 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 SART3Q15020 963 aaKnown RBP7.79□□□□□ -1.16
SCAF11-211ENST00000547950 NBPF20Q3BBV1 942 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 TMEM67Q5HYA8 995 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 OTOP2Q7RTS6 562 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 NCOA7Q8NI08 942 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 AFG1LQ8WV93 481 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 MAP4K1Q92918 833 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 PIGSQ96S52 555 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 IWS1Q96ST2 819 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 NOC4LQ9BVI4 516 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms