RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 RTP1P59025 263 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 STK3Q13188 491 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 SNX17Q15036 470 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 PKN1Q16512 942 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 UBE2SQ16763 222 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 PPP1R18Q6NYC8 613 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 OR6J1Q8NGC5 347 aa21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 ZFP91Q96JP5 570 aaPredicted RBP21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 RBM27Q9P2N5 1060 aaKnown RBP21.53■■□□□ 1.04
PRPF40B-206ENST00000547764 AK2P54819 239 aa21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 AKAP17AQ02040 695 aaKnown RBP21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 LY6KQ17RY6 165 aa21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 C1orf53Q5VUE5 145 aa21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 GLT1D1Q96MS3 346 aa21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 SLC26A6Q9BXS9 759 aa21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 RNF26Q9BY78 433 aaPredicted RBP21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 RIC8AQ9NPQ8 531 aa21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 STARD7Q9NQZ5 370 aa21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 TPCN1Q9ULQ1 816 aa21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 KIAA1217Q5T5P2 1943 aa21.52■■□□□ 1.04
PRPF40B-206ENST00000547764 SMCO2A6NFE2 343 aa21.51■■□□□ 1.03
PRPF40B-206ENST00000547764 ZEB2O60315 1214 aa21.51■■□□□ 1.03
PRPF40B-206ENST00000547764 MRPS9P82933 396 aaKnown RBP21.51■■□□□ 1.03
PRPF40B-206ENST00000547764 ANKRD1Q15327 319 aa21.51■■□□□ 1.03
PRPF40B-206ENST00000547764 TRIM60Q495X7 471 aa21.51■■□□□ 1.03
PRPF40B-206ENST00000547764 DDX41Q9UJV9 622 aaKnown RBP21.51■■□□□ 1.03
PRPF40B-206ENST00000547764 ATP11BQ9Y2G3 1177 aa21.51■■□□□ 1.03
PRPF40B-206ENST00000547764 MRVI1Q9Y6F6 885 aa21.51■■□□□ 1.03
PRPF40B-206ENST00000547764 CPLX1O14810 134 aa21.5■■□□□ 1.03
PRPF40B-206ENST00000547764 ADCY7P51828 1080 aa21.5■■□□□ 1.03
PRPF40B-206ENST00000547764 NEK4P51957 841 aa21.5■■□□□ 1.03
PRPF40B-206ENST00000547764 CXCL17Q6UXB2 119 aa21.5■■□□□ 1.03
PRPF40B-206ENST00000547764 VTI1AQ96AJ9 217 aa21.5■■□□□ 1.03
PRPF40B-206ENST00000547764 ZMYND8Q9ULU4 1186 aaPredicted RBP21.5■■□□□ 1.03
PRPF40B-206ENST00000547764 PCDHA6Q9UN73 950 aa21.5■■□□□ 1.03
PRPF40B-206ENST00000547764 PCDHA8Q9Y5H6 950 aa21.5■■□□□ 1.03
PRPF40B-206ENST00000547764 ELP1O95163 1332 aa21.5■■□□□ 1.03
PRPF40B-206ENST00000547764 SPDYE3A6NKU9 549 aa21.49■■□□□ 1.03
PRPF40B-206ENST00000547764 GH1P01241 217 aa21.49■■□□□ 1.03
PRPF40B-206ENST00000547764 SYN1P17600 705 aa21.49■■□□□ 1.03
PRPF40B-206ENST00000547764 CPT1AP50416 773 aa21.49■■□□□ 1.03
PRPF40B-206ENST00000547764 SCRN1Q12765 414 aa21.49■■□□□ 1.03
PRPF40B-206ENST00000547764 PCNX4Q63HM2 1172 aa21.49■■□□□ 1.03
PRPF40B-206ENST00000547764 TEX2Q8IWB9 1127 aa21.49■■□□□ 1.03
PRPF40B-206ENST00000547764 SLKQ9H2G2 1235 aaPredicted RBP21.49■■□□□ 1.03
PRPF40B-206ENST00000547764 RTEL1Q9NZ71 1219 aa21.49■■□□□ 1.03
PRPF40B-206ENST00000547764 GTF3C3Q9Y5Q9 886 aa21.49■■□□□ 1.03
PRPF40B-206ENST00000547764 A6NJR5 290 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 PFKFB2O60825 505 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 STAM2O75886 525 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 CABYRO75952 493 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 TLE2Q04725 743 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 ARHGAP1Q07960 439 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 SSRP1Q08945 709 aaKnown RBP21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 XRRA1Q6P2D8 792 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 KCNV1Q6PIU1 500 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 TRIM22Q8IYM9 498 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 INPP4AQ96PE3 977 aaPredicted RBP21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 C22orf23Q9BZE7 217 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 GLT8D2Q9H1C3 349 aa21.48■■□□□ 1.03
PRPF40B-206ENST00000547764 TGFB3P10600 412 aa21.47■■□□□ 1.03
PRPF40B-206ENST00000547764 GNPTABQ3T906 1256 aa21.47■■□□□ 1.03
PRPF40B-206ENST00000547764 BRDTQ58F21 947 aaPredicted RBP21.47■■□□□ 1.03
PRPF40B-206ENST00000547764 CPLX2Q6PUV4 134 aaKnown RBP21.47■■□□□ 1.03
PRPF40B-206ENST00000547764 CCDC12Q8WUD4 166 aaPredicted RBP21.47■■□□□ 1.03
PRPF40B-206ENST00000547764 AFG1LQ8WV93 481 aa21.47■■□□□ 1.03
PRPF40B-206ENST00000547764 ZMYND12Q9H0C1 365 aa21.47■■□□□ 1.03
PRPF40B-206ENST00000547764 POLR3EQ9NVU0 708 aa21.47■■□□□ 1.03
PRPF40B-206ENST00000547764 A0A0U1RQG5 324 aaPredicted RBP21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 ESYT2A0FGR8 921 aa21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 FOSP01100 380 aaPredicted RBP21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 MYL3P08590 195 aa21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 CLK2P49760 499 aaKnown RBP21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 CDK7P50613 346 aa21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 SP2Q02086 613 aa21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 PGBD1Q96JS3 809 aa21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 KIF2CQ99661 725 aa21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 C6orf50Q9HD87 102 aa21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 TMEM260Q9NX78 707 aa21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 PCDH10Q9P2E7 1040 aa21.46■■□□□ 1.03
PRPF40B-206ENST00000547764 SPATA31C2B4DYI2 1134 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 ARVCFO00192 962 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 ADAMTS3O15072 1205 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 PQBP1O60828 265 aaKnown RBP21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 UBA1P22314 1058 aaKnown RBP21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 ICAM3P32942 547 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 RBM25P49756 843 aaKnown RBP21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 PSMC6P62333 389 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 PURAQ00577 322 aaKnown RBP21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 SEMA3FQ13275 785 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 LAMC2Q13753 1193 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 ME3Q16798 604 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 ANKRD33Q7Z3H0 272 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 DHX37Q8IY37 1157 aaKnown RBP21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 EMID1Q96A84 441 aaPredicted RBP21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 EHMT1Q9H9B1 1298 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 VPS54Q9P1Q0 977 aa21.45■■□□□ 1.02
PRPF40B-206ENST00000547764 KPNA6O60684 536 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 DEXIO95424 95 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 LARGE1O95461 756 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms