RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 A0A1W2PQJ5 194 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 RAD21O60216 631 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 MARCH6O60337 910 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 LRRC63Q05C16 580 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 DACT2Q5SW24 774 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 GJA10Q969M2 543 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 PARD6BQ9BYG5 372 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 ZSWIM4Q9H7M6 989 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 ZNHIT6Q9NWK9 470 aaKnown RBP17.29■□□□□ 0.36
BRF1-212ENST00000547562 PCDHA1Q9Y5I3 950 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 SLX4Q8IY92 1834 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 ABCB11O95342 1321 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 USP17L15C9J2P7 530 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 USP17L13C9JLJ4 530 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 USP17L11C9JVI0 530 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 USP17L18D6R9N7 530 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 USP17L22D6RA61 530 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 USP17L17D6RBQ6 530 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 USP17L19D6RCP7 530 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 USP17L20D6RJB6 530 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 FGFR1OPO95684 399 aaKnown RBP17.29■□□□□ 0.36
BRF1-212ENST00000547562 RBM5P52756 815 aaKnown RBP eCLIP17.29■□□□□ 0.36
BRF1-212ENST00000547562 HERVK_113P62684 666 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 USP17L24Q0WX57 530 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 SLFN13Q68D06 897 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 USP17L6PQ6QN14 398 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 PCMTD1Q96MG8 357 aaPredicted RBP17.29■□□□□ 0.36
BRF1-212ENST00000547562 TRIM10Q9UDY6 481 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 PUF60Q9UHX1 559 aaKnown RBP17.29■□□□□ 0.36
BRF1-212ENST00000547562 GUCA1BQ9UMX6 200 aa17.29■□□□□ 0.36
BRF1-212ENST00000547562 KRT83P78385 493 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 CDC37Q16543 378 aaPredicted RBP17.28■□□□□ 0.36
BRF1-212ENST00000547562 HYIQ5T013 277 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 CC2D1AQ6P1N0 951 aaPredicted RBP17.28■□□□□ 0.36
BRF1-212ENST00000547562 SH3BP5LQ7L8J4 393 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 IQCDQ96DY2 449 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 KDM3AQ9Y4C1 1321 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 ECE2O60344 883 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
BRF1-212ENST00000547562 CYLC1P35663 651 aaPredicted RBP17.28■□□□□ 0.36
BRF1-212ENST00000547562 SEPT2Q15019 361 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 VWA3BQ502W6 1294 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 TATDN1Q6P1N9 297 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 ZNF662Q6ZS27 426 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 CCDC170Q8IYT3 715 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 DNAJC19Q96DA6 116 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 NT5C3AQ9H0P0 336 aa17.28■□□□□ 0.36
BRF1-212ENST00000547562 ATP8B1O43520 1251 aa17.27■□□□□ 0.36
BRF1-212ENST00000547562 SEC31AO94979 1220 aaKnown RBP17.27■□□□□ 0.36
BRF1-212ENST00000547562 USP11P51784 963 aa17.27■□□□□ 0.36
BRF1-212ENST00000547562 WHAMMP3Q1A5X7 153 aa17.27■□□□□ 0.36
BRF1-212ENST00000547562 MSL1Q68DK7 614 aa17.27■□□□□ 0.36
BRF1-212ENST00000547562 FOXR2Q6PJQ5 311 aa17.27■□□□□ 0.36
BRF1-212ENST00000547562 C2CD5Q86YS7 1000 aa17.27■□□□□ 0.36
BRF1-212ENST00000547562 SIAH1Q8IUQ4 282 aa17.27■□□□□ 0.36
BRF1-212ENST00000547562 TRIM34Q9BYJ4 488 aa17.27■□□□□ 0.36
BRF1-212ENST00000547562 NDST4Q9H3R1 872 aa17.27■□□□□ 0.36
BRF1-212ENST00000547562 NHEJ1Q9H9Q4 299 aaPredicted RBP17.27■□□□□ 0.36
BRF1-212ENST00000547562 APBA3O96018 575 aa17.27■□□□□ 0.35
BRF1-212ENST00000547562 TUBB4BP68371 445 aa17.27■□□□□ 0.35
BRF1-212ENST00000547562 CDK17Q00537 523 aa17.27■□□□□ 0.35
BRF1-212ENST00000547562 AMPD2Q01433 879 aa17.27■□□□□ 0.35
BRF1-212ENST00000547562 ICA1Q05084 483 aa17.27■□□□□ 0.35
BRF1-212ENST00000547562 MAN2A1Q16706 1144 aa17.27■□□□□ 0.35
BRF1-212ENST00000547562 LRRC55Q6ZSA7 311 aa17.27■□□□□ 0.35
BRF1-212ENST00000547562 ANO3Q9BYT9 981 aa17.27■□□□□ 0.35
BRF1-212ENST00000547562 EIF3CLB5ME19 914 aaKnown RBP17.26■□□□□ 0.35
BRF1-212ENST00000547562 PSMD14O00487 310 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 COASYQ13057 564 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 CCDC122Q5T0U0 273 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 TMEM179Q6ZVK1 233 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 GLIS3Q8NEA6 775 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 EIF3CQ99613 913 aaKnown RBP17.26■□□□□ 0.35
BRF1-212ENST00000547562 KCNMB3Q9NPA1 279 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 SERPINA10Q9UK55 444 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 SIK3Q9Y2K2 1263 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 CYP3A7-CYP3A51PA0A087WV96 503 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 CYP3A7P24462 503 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 STYK1Q6J9G0 422 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 MBOAT7Q96N66 472 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 TSG101Q99816 390 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 MYO6Q9UM54 1294 aa17.26■□□□□ 0.35
BRF1-212ENST00000547562 MEIS2O14770 477 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 TFRCP02786 760 aaKnown RBP17.25■□□□□ 0.35
BRF1-212ENST00000547562 PLA2G4AP47712 749 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 AP3B2Q13367 1082 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 LRRC41Q15345 812 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 KIAA1328Q86T90 577 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 MYOCDQ8IZQ8 938 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 ANKZF1Q9H8Y5 726 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 ARFGAP3Q9NP61 516 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 PANK4Q9NVE7 773 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 CCDC151A5D8V7 595 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 H0YIN7 160 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 SLC26A4O43511 780 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 IPO7O95373 1038 aaKnown RBP17.25■□□□□ 0.35
BRF1-212ENST00000547562 TBC1D8O95759 1140 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 HNRNPH3P31942 346 aaKnown RBP17.25■□□□□ 0.35
BRF1-212ENST00000547562 MOXD1Q6UVY6 613 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 CCDC84Q86UT8 332 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms