RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ZNF333Q96JL9 665 aa26.45■■□□□ 1.82
SMARCD1-203ENST00000547247 HMX1Q9NP08 348 aaPredicted RBP26.45■■□□□ 1.82
SMARCD1-203ENST00000547247 ZHX1Q9UKY1 873 aaPredicted RBP26.45■■□□□ 1.82
SMARCD1-203ENST00000547247 STAM2O75886 525 aa26.44■■□□□ 1.82
SMARCD1-203ENST00000547247 ZNF865P0CJ78 1059 aaPredicted RBP26.44■■□□□ 1.82
SMARCD1-203ENST00000547247 MRPS9P82933 396 aaKnown RBP26.44■■□□□ 1.82
SMARCD1-203ENST00000547247 ARHGAP4P98171 946 aa26.44■■□□□ 1.82
SMARCD1-203ENST00000547247 NONOQ15233 471 aaKnown RBP eCLIP26.44■■□□□ 1.82
SMARCD1-203ENST00000547247 FBXO16Q8IX29 292 aaPredicted RBP26.44■■□□□ 1.82
SMARCD1-203ENST00000547247 GNL2Q13823 731 aaKnown RBP26.43■■□□□ 1.82
SMARCD1-203ENST00000547247 TRPV1Q8NER1 839 aa26.43■■□□□ 1.82
SMARCD1-203ENST00000547247 TBCKQ8TEA7 893 aa26.43■■□□□ 1.82
SMARCD1-203ENST00000547247 TNFRSF25Q93038 417 aa26.43■■□□□ 1.82
SMARCD1-203ENST00000547247 FOXP1Q9H334 677 aaPredicted RBP26.43■■□□□ 1.82
SMARCD1-203ENST00000547247 LRRC37A2A6NM11 1700 aa26.42■■□□□ 1.82
SMARCD1-203ENST00000547247 CNGA1P29973 690 aa26.42■■□□□ 1.82
SMARCD1-203ENST00000547247 PIK3AP1Q6ZUJ8 805 aa26.42■■□□□ 1.82
SMARCD1-203ENST00000547247 CRYGNQ8WXF5 182 aa26.42■■□□□ 1.82
SMARCD1-203ENST00000547247 ZFP91Q96JP5 570 aaPredicted RBP26.42■■□□□ 1.82
SMARCD1-203ENST00000547247 TSHZ2Q9NRE2 1034 aa26.42■■□□□ 1.82
SMARCD1-203ENST00000547247 SYT1P21579 422 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 CCND3P30281 292 aaPredicted RBP26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 MTFR1Q15390 333 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 TAPT1Q6NXT6 567 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 RTEL1Q9NZ71 1219 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 MYCP01106 439 aaPredicted RBP26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 CYP3A4P08684 503 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 CCDC144BQ3MJ40 725 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 GNPTABQ3T906 1256 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 MCTP1Q6DN14 999 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 SEPT14Q6ZU15 432 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 PDGFCQ9NRA1 345 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 FAM184BQ9ULE4 1060 aa26.41■■□□□ 1.82
SMARCD1-203ENST00000547247 SEPT4O43236 478 aa26.4■■□□□ 1.82
SMARCD1-203ENST00000547247 CCL5P13501 91 aa26.4■■□□□ 1.82
SMARCD1-203ENST00000547247 ZNF76P36508 570 aa26.4■■□□□ 1.82
SMARCD1-203ENST00000547247 USP11P51784 963 aa26.4■■□□□ 1.82
SMARCD1-203ENST00000547247 INF2Q27J81 1249 aa26.4■■□□□ 1.82
SMARCD1-203ENST00000547247 SCFD2Q8WU76 684 aa26.4■■□□□ 1.82
SMARCD1-203ENST00000547247 INPP4AQ96PE3 977 aaPredicted RBP26.4■■□□□ 1.82
SMARCD1-203ENST00000547247 UNC93B1Q9H1C4 597 aa26.4■■□□□ 1.82
SMARCD1-203ENST00000547247 VPS37CA5D8V6 355 aaPredicted RBP26.39■■□□□ 1.82
SMARCD1-203ENST00000547247 RGS20O76081 388 aa26.39■■□□□ 1.82
SMARCD1-203ENST00000547247 AKR1A1P14550 325 aa26.39■■□□□ 1.82
SMARCD1-203ENST00000547247 U2AF2P26368 475 aaKnown RBP eCLIP26.39■■□□□ 1.821e-6■□□□□ 9.6
SMARCD1-203ENST00000547247 EARS2Q5JPH6 523 aaKnown RBP26.39■■□□□ 1.82
SMARCD1-203ENST00000547247 IQSEC1Q6DN90 963 aa26.39■■□□□ 1.82
SMARCD1-203ENST00000547247 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.39■■□□□ 1.82
SMARCD1-203ENST00000547247 UBIAD1Q9Y5Z9 338 aa26.39■■□□□ 1.82
SMARCD1-203ENST00000547247 MYH7BA7E2Y1 1941 aa26.39■■□□□ 1.81
SMARCD1-203ENST00000547247 RBM47A0AV96 593 aaKnown RBP26.38■■□□□ 1.81
SMARCD1-203ENST00000547247 ADCYAP1R1P41586 468 aa26.38■■□□□ 1.81
SMARCD1-203ENST00000547247 NLRX1Q86UT6 975 aa26.38■■□□□ 1.81
SMARCD1-203ENST00000547247 NOSTRINQ8IVI9 506 aa26.38■■□□□ 1.81
SMARCD1-203ENST00000547247 MXRA8Q9BRK3 442 aa26.38■■□□□ 1.81
SMARCD1-203ENST00000547247 RNF208Q9H0X6 261 aa26.38■■□□□ 1.81
SMARCD1-203ENST00000547247 RBM19Q9Y4C8 960 aaKnown RBP26.38■■□□□ 1.81
SMARCD1-203ENST00000547247 KIF28PB7ZC32 967 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 PDIA4P13667 645 aaKnown RBP26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 TTLL4Q14679 1199 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 CEP55Q53EZ4 464 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 NEK8Q86SG6 692 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 WDR11Q9BZH6 1224 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 BRCA2P51587 3418 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 FAM205CA6NFA0 338 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 STX6O43752 255 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 MSCO60682 206 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 ITGB5P18084 799 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 CIITAP33076 1130 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 TNFAIP2Q03169 654 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 KCNV1Q6PIU1 500 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 GPRASP2Q96D09 838 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 JADE2Q9NQC1 790 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 PAK6Q9NQU5 681 aaPredicted RBP26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 DDX20Q9UHI6 824 aaKnown RBP26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 MRVI1Q9Y6F6 885 aa26.37■■□□□ 1.81
SMARCD1-203ENST00000547247 KIAA1217Q5T5P2 1943 aa26.36■■□□□ 1.81
SMARCD1-203ENST00000547247 FIBPO43427 364 aa26.36■■□□□ 1.81
SMARCD1-203ENST00000547247 EDIL3O43854 480 aa26.36■■□□□ 1.81
SMARCD1-203ENST00000547247 SOX10P56693 466 aa26.36■■□□□ 1.81
SMARCD1-203ENST00000547247 CYP2W1Q8TAV3 490 aa26.36■■□□□ 1.81
SMARCD1-203ENST00000547247 DAXXQ9UER7 740 aaPredicted RBP26.36■■□□□ 1.81
SMARCD1-203ENST00000547247 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 FAM86B1E9PN63 330 aa26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 MAFGO15525 162 aa26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 FAM86B2P0C5J1 330 aa26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 TXNP10599 105 aaKnown RBP26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 TGFB3P10600 412 aa26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 ICAM3P32942 547 aa26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 MTMR1Q13613 665 aa26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 LETM2Q2VYF4 491 aa26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 CCDC62Q6P9F0 684 aa26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 NIPA1Q7RTP0 329 aa26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 CDHR1Q96JP9 859 aa26.35■■□□□ 1.81
SMARCD1-203ENST00000547247 SPATA31C2B4DYI2 1134 aa26.34■■□□□ 1.81
SMARCD1-203ENST00000547247 MEIS1O00470 390 aa26.34■■□□□ 1.81
SMARCD1-203ENST00000547247 MOXD1Q6UVY6 613 aa26.34■■□□□ 1.81
SMARCD1-203ENST00000547247 NAP1L4Q99733 375 aaKnown RBP26.34■■□□□ 1.81
SMARCD1-203ENST00000547247 MTMR6Q9Y217 621 aa26.34■■□□□ 1.81
SMARCD1-203ENST00000547247 ADCY6O43306 1168 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms