RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ATP4AP20648 1035 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 DPYDQ12882 1025 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 ENOX2Q16206 610 aaKnown RBP8.7□□□□□ -1.02
UBR1-202ENST00000546274 TTMPQ5BVD1 217 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 PPP1R15BQ5SWA1 713 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 ENAHQ8N8S7 591 aaPredicted RBP8.7□□□□□ -1.02
UBR1-202ENST00000546274 CAGE1Q8TC20 777 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 PAGE5Q96GU1 130 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 PANX2Q96RD6 677 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 ACTR5Q9H9F9 607 aaPredicted RBP8.7□□□□□ -1.02
UBR1-202ENST00000546274 ADD3Q9UEY8 706 aaKnown RBP8.7□□□□□ -1.02
UBR1-202ENST00000546274 A0A0G2JS52 829 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 PPP1R3GB7ZBB8 358 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 PRDM1O75626 825 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 CAPN15O75808 1086 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 MCM3P25205 808 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 POLE2P56282 527 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 MXRA7P84157 204 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 RBL2Q08999 1139 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 NNTQ13423 1086 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 KANK3Q6NY19 840 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 RBM12BQ8IXT5 1001 aaKnown RBP8.7□□□□□ -1.02
UBR1-202ENST00000546274 TMTC2Q8N394 836 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 FAM163AQ96GL9 167 aaPredicted RBP8.7□□□□□ -1.02
UBR1-202ENST00000546274 MMS19Q96T76 1030 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 GORASP1Q9BQQ3 440 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 NACAP1Q9BZK3 213 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 CEP131Q9UPN4 1083 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 RTL9Q8NET4 1388 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 SYNRGQ9UMZ2 1314 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 hCG_1642624A0A1W2PR95 340 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 WTIPA6NIX2 430 aaPredicted RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 PLEKHA8P1O95397 391 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 HPDP32754 393 aaPredicted RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 SCTRP47872 440 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 IFFO1Q0D2I5 559 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 SPATA1Q5VX52 437 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 INTS5Q6P9B9 1019 aaKnown RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 SMYD4Q8IYR2 804 aaPredicted RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 SYMPKQ92797 1274 aaKnown RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 RIOK1Q9BRS2 568 aaKnown RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 OSBPL1AQ9BXW6 950 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 COL5A3P25940 1745 aaPredicted RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 ZNF804BA4D1E1 1349 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 AKR1B15C9JRZ8 316 aaPredicted RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 PPP1R37O75864 691 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 FECHP22830 423 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 CUL3Q13618 768 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 ZNF384Q8TF68 577 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 DNAAF2Q9NVR5 837 aaKnown RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 XDHP47989 1333 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 ADAMTS3O15072 1205 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 AFMP43652 599 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 ELF3P78545 371 aaPredicted RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 EVX2Q03828 476 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 PTGISQ16647 500 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 ANKRD20A8PQ5CZ79 823 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 CCNI2Q6ZMN8 369 aaPredicted RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 TEKT4Q8WW24 435 aa8.69□□□□□ -1.02
UBR1-202ENST00000546274 UPF1Q92900 1129 aaKnown RBP eCLIP8.69□□□□□ -1.02
UBR1-202ENST00000546274 RNF41Q9H4P4 317 aaPredicted RBP8.69□□□□□ -1.02
UBR1-202ENST00000546274 TRIM75PA6NK02 468 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 PRPF3O43395 683 aaKnown RBP8.68□□□□□ -1.02
UBR1-202ENST00000546274 GYPCP04921 128 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 GCLCP48506 637 aaPredicted RBP8.68□□□□□ -1.02
UBR1-202ENST00000546274 STX17P56962 302 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 CHRNDQ07001 517 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 TROAPQ12815 778 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 TUBB2AQ13885 445 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 FAM196AQ6ZSG2 479 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 CYFIP2Q96F07 1278 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 RBM17Q96I25 401 aaKnown RBP8.68□□□□□ -1.02
UBR1-202ENST00000546274 ZSCAN10Q96SZ4 725 aaPredicted RBP8.68□□□□□ -1.02
UBR1-202ENST00000546274 UBAC1Q9BSL1 405 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 TUBB2BQ9BVA1 445 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 EBF2Q9HAK2 575 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 ZFATQ9P243 1243 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 GUCA1BQ9UMX6 200 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 RGPD3A6NKT7 1758 aaPredicted RBP8.68□□□□□ -1.02
UBR1-202ENST00000546274 MAST2Q6P0Q8 1798 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 RGPD4Q7Z3J3 1758 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 CYP2D7A0A087X1C5 515 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 DPPA5A6NC42 116 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 RNF225M0QZC1 329 aaPredicted RBP8.68□□□□□ -1.02
UBR1-202ENST00000546274 MGRN1O60291 552 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 HSF2BPO75031 334 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 MFAP3LO75121 409 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 ZNF189O75820 626 aaPredicted RBP8.68□□□□□ -1.02
UBR1-202ENST00000546274 NTSR2O95665 410 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 FGRP09769 529 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 KRT2P35908 639 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 MATR3P43243 847 aaKnown RBP eCLIP8.68□□□□□ -1.02
UBR1-202ENST00000546274 SKOR1P84550 965 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 ZRSR2Q15696 482 aaKnown RBP8.68□□□□□ -1.02
UBR1-202ENST00000546274 IL17AQ16552 155 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 GSDMAQ96QA5 445 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 LRP2BPQ9P2M1 347 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 IQSEC3Q9UPP2 1182 aaPredicted RBP8.68□□□□□ -1.02
UBR1-202ENST00000546274 MAPK8IP1Q9UQF2 711 aa8.68□□□□□ -1.02
UBR1-202ENST00000546274 BAZ2BQ9UIF8 2168 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms