RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ARIH2O95376 493 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 TXNP10599 105 aaKnown RBP13.67□□□□□ -0.22
YBX3-217ENST00000546164 PDIA3P30101 505 aaKnown RBP13.67□□□□□ -0.22
YBX3-217ENST00000546164 CPT1AP50416 773 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 CDK7P50613 346 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 TLE2Q04725 743 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 TOB2Q14106 344 aaPredicted RBP13.67□□□□□ -0.22
YBX3-217ENST00000546164 WWC2Q6AWC2 1192 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 ANKRD33Q7Z3H0 272 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 FCHSD1Q86WN1 690 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 IL31RAQ8NI17 732 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 TOX2Q96NM4 488 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 GDF15Q99988 308 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
YBX3-217ENST00000546164 RBM27Q9P2N5 1060 aaKnown RBP13.67□□□□□ -0.22
YBX3-217ENST00000546164 ATP11BQ9Y2G3 1177 aa13.67□□□□□ -0.22
YBX3-217ENST00000546164 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
YBX3-217ENST00000546164 A0A0U1RQG5 324 aaPredicted RBP13.66□□□□□ -0.22
YBX3-217ENST00000546164 CCND2P30279 289 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 NTRK3Q16288 839 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 BRDTQ58F21 947 aaPredicted RBP13.66□□□□□ -0.22
YBX3-217ENST00000546164 XRRA1Q6P2D8 792 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 KCNV1Q6PIU1 500 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 CXCL17Q6UXB2 119 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 SEPT14Q6ZU15 432 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 HEATR3Q7Z4Q2 680 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 SLC43A3Q8NBI5 491 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 OR6J1Q8NGC5 347 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 SMARCC2Q8TAQ2 1214 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 GPKOWQ92917 476 aaPredicted RBP eCLIP13.66□□□□□ -0.22
YBX3-217ENST00000546164 EMID1Q96A84 441 aaPredicted RBP13.66□□□□□ -0.22
YBX3-217ENST00000546164 ZNF274Q96GC6 653 aaPredicted RBP13.66□□□□□ -0.22
YBX3-217ENST00000546164 SEZ6LQ9BYH1 1024 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 ALDH8A1Q9H2A2 487 aaPredicted RBP13.66□□□□□ -0.22
YBX3-217ENST00000546164 BARHL2Q9NY43 387 aa13.66□□□□□ -0.22
YBX3-217ENST00000546164 DDX41Q9UJV9 622 aaKnown RBP13.66□□□□□ -0.22
YBX3-217ENST00000546164 NAP1L2Q9ULW6 460 aaPredicted RBP13.66□□□□□ -0.22
YBX3-217ENST00000546164 COLQQ9Y215 455 aaPredicted RBP13.66□□□□□ -0.22
YBX3-217ENST00000546164 MROH7Q68CQ1 1323 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 ARVCFO00192 962 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 PRPF3O43395 683 aaKnown RBP13.65□□□□□ -0.22
YBX3-217ENST00000546164 KPNA6O60684 536 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 GH1P01241 217 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 TGFB3P10600 412 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 MYCLP12524 364 aaPredicted RBP13.65□□□□□ -0.22
YBX3-217ENST00000546164 IFNAR1P17181 557 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 BMP8BP34820 402 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 MRPS9P82933 396 aaKnown RBP13.65□□□□□ -0.22
YBX3-217ENST00000546164 ARHGAP1Q07960 439 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 PFKFB3Q16875 520 aaPredicted RBP13.65□□□□□ -0.22
YBX3-217ENST00000546164 TYW1BQ6NUM6 668 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 COPS5Q92905 334 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
YBX3-217ENST00000546164 PDLIM7Q9NR12 457 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 PDRG1Q9NUG6 133 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 POLR3EQ9NVU0 708 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 MRVI1Q9Y6F6 885 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 LAMA3Q16787 3333 aa13.65□□□□□ -0.22
YBX3-217ENST00000546164 A0A1W2PPC1 479 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 STXBP3O00186 592 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 SCG2P13521 617 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 SYN1P17600 705 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 ICAM3P32942 547 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 MAGEA10P43363 369 aaPredicted RBP13.64□□□□□ -0.23
YBX3-217ENST00000546164 NAPAP54920 295 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 PURAQ00577 322 aaKnown RBP13.64□□□□□ -0.23
YBX3-217ENST00000546164 LY6KQ17RY6 165 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 GNPTABQ3T906 1256 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 HABP4Q5JVS0 413 aaKnown RBP13.64□□□□□ -0.23
YBX3-217ENST00000546164 PCNX4Q63HM2 1172 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 RNF26Q9BY78 433 aaPredicted RBP13.64□□□□□ -0.23
YBX3-217ENST00000546164 GLT8D2Q9H1C3 349 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 RIC8AQ9NPQ8 531 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 PRKAG2Q9UGJ0 569 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
YBX3-217ENST00000546164 ESYT2A0FGR8 921 aa13.63□□□□□ -0.23
YBX3-217ENST00000546164 DCDC2CA8MYV0 355 aa13.63□□□□□ -0.23
YBX3-217ENST00000546164 KIAA0355O15063 1070 aa13.63□□□□□ -0.23
YBX3-217ENST00000546164 PQBP1O60828 265 aaKnown RBP13.63□□□□□ -0.23
YBX3-217ENST00000546164 SEC24BO95487 1268 aa13.63□□□□□ -0.23
YBX3-217ENST00000546164 CLTBP09497 229 aa13.63□□□□□ -0.23
YBX3-217ENST00000546164 FAAP100Q0VG06 881 aa13.63□□□□□ -0.23
YBX3-217ENST00000546164 LAMC2Q13753 1193 aa13.63□□□□□ -0.23
YBX3-217ENST00000546164 PKN1Q16512 942 aa13.63□□□□□ -0.23
YBX3-217ENST00000546164 C8orf34Q49A92 452 aa13.63□□□□□ -0.23
YBX3-217ENST00000546164 VTI1AQ96AJ9 217 aa13.63□□□□□ -0.23
YBX3-217ENST00000546164 MTG1Q9BT17 334 aaPredicted RBP13.63□□□□□ -0.23
YBX3-217ENST00000546164 KIAA1217Q5T5P2 1943 aa13.62□□□□□ -0.23
YBX3-217ENST00000546164 TRIM43BA6NCK2 446 aa13.62□□□□□ -0.23
YBX3-217ENST00000546164 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
YBX3-217ENST00000546164 SPATA31C2B4DYI2 1134 aa13.62□□□□□ -0.23
YBX3-217ENST00000546164 FIBPO43427 364 aa13.62□□□□□ -0.23
YBX3-217ENST00000546164 FOSP01100 380 aaPredicted RBP13.62□□□□□ -0.23
YBX3-217ENST00000546164 MMP3P08254 477 aa13.62□□□□□ -0.23
YBX3-217ENST00000546164 HOXD8P13378 290 aaPredicted RBP13.62□□□□□ -0.23
YBX3-217ENST00000546164 UBA1P22314 1058 aaKnown RBP13.62□□□□□ -0.23
YBX3-217ENST00000546164 ADCY7P51828 1080 aa13.62□□□□□ -0.23
YBX3-217ENST00000546164 AP3B2Q13367 1082 aa13.62□□□□□ -0.23
YBX3-217ENST00000546164 ITGA7Q13683 1181 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms