RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 PDE4BQ07343 736 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 STRN3Q13033 797 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 HSP90AA2PQ14568 343 aaPredicted RBP4.5□□□□□ -1.69
CUL3-215ENST00000546102 LHFPL2Q6ZUX7 228 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 C14orf80Q86SX3 495 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 ANKLE2Q86XL3 938 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 PPP1R14AQ96A00 147 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 MTMR8Q96EF0 704 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 AARSD1Q9BTE6 412 aaKnown RBP4.5□□□□□ -1.69
CUL3-215ENST00000546102 MRPL4Q9BYD3 311 aaKnown RBP4.5□□□□□ -1.69
CUL3-215ENST00000546102 LRP2BPQ9P2M1 347 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 CSADQ9Y600 493 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 ROCK2O75116 1388 aaKnown RBP4.5□□□□□ -1.69
CUL3-215ENST00000546102 TP53P04637 393 aaPredicted RBP4.49□□□□□ -1.69
CUL3-215ENST00000546102 KRT18P05783 430 aaKnown RBP4.49□□□□□ -1.69
CUL3-215ENST00000546102 NAT2P11245 290 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 RAG1P15918 1043 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 GRK4P32298 578 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 NEK2P51955 445 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 PPP2R2AP63151 447 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 ITKQ08881 620 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 MTMR1Q13613 665 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 TMEM201Q5SNT2 666 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 TDRD10Q5VZ19 366 aaKnown RBP4.49□□□□□ -1.69
CUL3-215ENST00000546102 PPP4R4Q6NUP7 873 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 SCUBE1Q8IWY4 988 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 CHPFQ8IZ52 775 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 MYO1HQ8N1T3 1032 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 RNF214Q8ND24 703 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 WDR66Q8TBY9 1149 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 DDX1Q92499 740 aaKnown RBP4.49□□□□□ -1.69
CUL3-215ENST00000546102 APBA2Q99767 749 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 LGR4Q9BXB1 951 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 ZIM2Q9NZV7 527 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 PLAGL2Q9UPG8 496 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 FER1L4A9Z1Z3 1794 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 PPLO60437 1756 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 EIF3AQ14152 1382 aaKnown RBP4.49□□□□□ -1.69
CUL3-215ENST00000546102 USP47Q96K76 1375 aa4.49□□□□□ -1.69
CUL3-215ENST00000546102 KDM5AP29375 1690 aaKnown RBP4.48□□□□□ -1.69
CUL3-215ENST00000546102 ANKRD34BA5PLL1 514 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 FAM83GA6ND36 823 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 NFIBO00712 420 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 PRODHO43272 600 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 AKAP10O43572 662 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 DNAJC8O75937 253 aaPredicted RBP4.48□□□□□ -1.69
CUL3-215ENST00000546102 TSPAN15O95858 294 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 NEK4P51957 841 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 ERVK-24P63145 666 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 SUMO1P63165 101 aaKnown RBP4.48□□□□□ -1.69
CUL3-215ENST00000546102 MESP2Q0VG99 397 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 OS9Q13438 667 aaPredicted RBP4.48□□□□□ -1.69
CUL3-215ENST00000546102 PCBP1Q15365 356 aaKnown RBP eCLIP4.48□□□□□ -1.69
CUL3-215ENST00000546102 SYCP2LQ5T4T6 812 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 PKN3Q6P5Z2 889 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 SYDE1Q6ZW31 735 aaPredicted RBP4.48□□□□□ -1.69
CUL3-215ENST00000546102 CDC37L1Q7L3B6 337 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 CYFIP1Q7L576 1253 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 NECAB2Q7Z6G3 386 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 PPFIBP1Q86W92 1011 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 C12orf40Q86WS4 652 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 PPM1KQ8N3J5 372 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 FAM13CQ8NE31 585 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 ISL2Q96A47 359 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 ACSF2Q96CM8 615 aaPredicted RBP4.48□□□□□ -1.69
CUL3-215ENST00000546102 FGD4Q96M96 766 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 MPHOSPH6Q99547 160 aaKnown RBP4.48□□□□□ -1.69
CUL3-215ENST00000546102 CCDC8Q9H0W5 538 aaPredicted RBP4.48□□□□□ -1.69
CUL3-215ENST00000546102 PRDM7Q9NQW5 492 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 AASDHPPTQ9NRN7 309 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 INTS7Q9NVH2 962 aaKnown RBP4.48□□□□□ -1.69
CUL3-215ENST00000546102 SLC5A4Q9NY91 659 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 SUSD2Q9UGT4 822 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 NDOR1Q9UHB4 597 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 SFMBT1Q9UHJ3 866 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 GPRASP1Q5JY77 1395 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 NRXN1Q9ULB1 1477 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 IQGAP1P46940 1657 aa4.48□□□□□ -1.69
CUL3-215ENST00000546102 RPGRIP1LQ68CZ1 1315 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 NEXMIFQ5QGS0 1516 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 IGF2BP3O00425 579 aaKnown RBP eCLIP4.47□□□□□ -1.69
CUL3-215ENST00000546102 MYL1P05976 194 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 ITGAVP06756 1048 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 EPHX1P07099 455 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 GLI1P08151 1106 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 HSPA5P11021 654 aaKnown RBP4.47□□□□□ -1.69
CUL3-215ENST00000546102 CLCN7P51798 805 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 ZNF143P52747 638 aaPredicted RBP4.47□□□□□ -1.69
CUL3-215ENST00000546102 PMS1P54277 932 aaKnown RBP4.47□□□□□ -1.69
CUL3-215ENST00000546102 ETF1P62495 437 aaKnown RBP4.47□□□□□ -1.69
CUL3-215ENST00000546102 STAT4Q14765 748 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 NBPF8Q3BBV2 869 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 RGL3Q3MIN7 710 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 BBS9Q3SYG4 887 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 HEATR6Q6AI08 1181 aaKnown RBP4.47□□□□□ -1.69
CUL3-215ENST00000546102 NSMFQ6X4W1 530 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 TSHZ1Q6ZSZ6 1077 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 BRAPQ7Z569 592 aa4.47□□□□□ -1.69
CUL3-215ENST00000546102 APBB1IPQ7Z5R6 666 aaPredicted RBP4.47□□□□□ -1.69
CUL3-215ENST00000546102 ZNF227Q86WZ6 799 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms