RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CCDC24Q8N4L8 307 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 ENAHQ8N8S7 591 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 PIGBQ92521 554 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 NUP88Q99567 741 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 EIF3CQ99613 913 aaKnown RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 LRRC27Q9C0I9 530 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 NUCKS1Q9H1E3 243 aaKnown RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 SENP2Q9HC62 589 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 ARPP21Q9UBL0 812 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 EGFL7Q9UHF1 273 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 KCNJ14Q9UNX9 436 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 ZNF652Q9Y2D9 606 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 SAR1BQ9Y6B6 198 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 CICQ96RK0 1608 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 ERICH4A6NGS2 130 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 hCG_1984214I3L0E3 225 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 TEX33O43247 280 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 USO1O60763 962 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 SRGNP10124 158 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 RXRAP19793 462 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 CYP7A1P22680 504 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 SMARCA1P28370 1054 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 TNFRSF8P28908 595 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 HNRNPH3P31942 346 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 LMAN1P49257 510 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 EVA1CP58658 441 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 NNTQ13423 1086 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 ERFEQ4G0M1 354 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 GLE1Q53GS7 698 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 CAVIN4Q5BKX8 364 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 CLEC4GQ6UXB4 293 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 BRINP3Q76B58 766 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 DGKHQ86XP1 1220 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 TRMT44Q8IYL2 757 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 LCORLQ8N3X6 602 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 ZNF713Q8N859 430 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 MB21D1Q8N884 522 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 EIF1ADQ8N9N8 165 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 C1orf131Q8NDD1 294 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 TRIM58Q8NG06 486 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 ZNF507Q8TCN5 953 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 NUP133Q8WUM0 1156 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 NELFBQ8WX92 580 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 PURBQ96QR8 312 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 ERGIC2Q96RQ1 377 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 RIOK1Q9BRS2 568 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 DESI2Q9BSY9 194 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 MYL10Q9BUA6 226 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 C1QTNF2Q9BXJ5 285 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 CRNKL1Q9BZJ0 848 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 ABCB6Q9NP58 842 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 LUC7LQ9NQ29 371 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 LZTFL1Q9NQ48 299 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 DISC1Q9NRI5 854 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 TOMM22Q9NS69 142 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 CXXC1Q9P0U4 656 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 CTNND2Q9UQB3 1225 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 PCDHGA11Q9Y5H2 935 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 MYH3P11055 1940 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 BCORQ6W2J9 1755 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 XDHP47989 1333 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 CNTNAP5Q8WYK1 1306 aa7.22□□□□□ -1.25
SNHG1-225ENST00000545920 ATXN2Q99700 1313 aaKnown RBP7.22□□□□□ -1.25
SNHG1-225ENST00000545920 SHANK3Q9BYB0 1731 aa7.21□□□□□ -1.25
SNHG1-225ENST00000545920 SRRM3A6NNA2 597 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 PPFIA4O75335 1185 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 PARP1P09874 1014 aaKnown RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 CAPN2P17655 700 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 TCP1P17987 556 aaKnown RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 STAT6P42226 847 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 MAGEA9P43362 315 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 AFMP43652 599 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 FXR1P51114 621 aaKnown RBP eCLIP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 EIF5P55010 431 aaKnown RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 NLRP5P59047 1200 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 ERVK-24P63145 666 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 GTF2IP78347 998 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 UBXN1Q04323 297 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 GRIN1Q05586 938 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 SF3B3Q15393 1217 aaKnown RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 NPY5RQ15761 445 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 HLFQ16534 295 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 ZNF827Q17R98 1081 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 RRP12Q5JTH9 1297 aaKnown RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 ALS2CLQ60I27 953 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 SPTY2D1Q68D10 685 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 KLHL10Q6JEL2 608 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 CNNM4Q6P4Q7 775 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 DTHD1Q6ZMT9 781 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 SRLQ86TD4 932 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 CCDC84Q86UT8 332 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 BPHLQ86WA6 291 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 ZSCAN29Q8IWY8 852 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 MMGT1Q8N4V1 131 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 GIMAP8Q8ND71 665 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 AFAP1L1Q8TED9 768 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 COG1Q8WTW3 980 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 PPM1EQ8WY54 764 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms