RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 OTUD5Q96G74 571 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 RFX7Q2KHR2 1363 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 SPOPO43791 374 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 STK10O94804 968 aaKnown RBP9.46□□□□□ -0.9
CLIP1-218ENST00000545889 BMP3P12645 472 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 GMPSP49915 693 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-218ENST00000545889 CKAP4Q07065 602 aaKnown RBP9.46□□□□□ -0.9
CLIP1-218ENST00000545889 KIF5AQ12840 1032 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 RSBN1LQ6PCB5 846 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-218ENST00000545889 FOXP4Q8IVH2 680 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-218ENST00000545889 MB21D2Q8IYB1 491 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-218ENST00000545889 GOLGA5Q8TBA6 731 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 NT5C3AQ9H0P0 336 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 PLEKHA4Q9H4M7 779 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 DACT1Q9NYF0 836 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 FRMD3A2A2Y4 597 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 SMIM22K7EJ46 135 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 UBXN1Q04323 297 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 CXCL9Q07325 125 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 PPP2R5DQ14738 602 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 NSUN7Q8NE18 718 aaKnown RBP9.46□□□□□ -0.9
CLIP1-218ENST00000545889 PRMT6Q96LA8 375 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-218ENST00000545889 TBC1D7Q9P0N9 293 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 PCDHA12Q9UN75 941 aa9.46□□□□□ -0.9
CLIP1-218ENST00000545889 AFDNP55196 1824 aaKnown RBP9.45□□□□□ -0.9
CLIP1-218ENST00000545889 LRRC37A3O60309 1634 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 ZMYM6O95789 1325 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 FLT1P17948 1338 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 ALX1Q15699 326 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 UPF1Q92900 1129 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLIP1-218ENST00000545889 ZNF341Q9BYN7 854 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 SENP2Q9HC62 589 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 SPTLC3Q9NUV7 552 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 DNAI1Q9UI46 699 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 LCMT1Q9UIC8 334 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 SEC31AO94979 1220 aaKnown RBP9.45□□□□□ -0.9
CLIP1-218ENST00000545889 HUNKP57058 714 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 SEPT2Q15019 361 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 ODR4Q5SWX8 454 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 C12orf60Q5U649 245 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 CCDC155Q8N6L0 562 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 ENAHQ8N8S7 591 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-218ENST00000545889 TTC14Q96N46 770 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-218ENST00000545889 MTMR6Q9Y217 621 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 PCDHB13Q9Y5F0 798 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 GLI3P10071 1580 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 ARHGEF37A1IGU5 675 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 NEMFO60524 1076 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 ATP2A2P16615 1042 aaKnown RBP9.45□□□□□ -0.9
CLIP1-218ENST00000545889 ECE1P42892 770 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 LIG3P49916 1009 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 UBXN2AP68543 259 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 GCNAQ96QF7 691 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 RABEP2Q9H5N1 569 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 C5P01031 1676 aa9.45□□□□□ -0.9
CLIP1-218ENST00000545889 BTBD18B2RXH4 712 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 GIPC1O14908 333 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 AKR1B1P15121 316 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 PEX19P40855 299 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 TBC1D8BQ0IIM8 1120 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 GEN1Q17RS7 908 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 MAATS1Q7Z4T9 603 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 METTL23Q86XA0 190 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 NELFCDQ8IXH7 590 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 CEP95Q96GE4 821 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 FAM49AQ9H0Q0 323 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-218ENST00000545889 NRBP1Q9UHY1 535 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 HACL1Q9UJ83 578 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 LUC7L2Q9Y383 392 aaKnown RBP9.44□□□□□ -0.9
CLIP1-218ENST00000545889 TLR3O15455 904 aaKnown RBP9.44□□□□□ -0.9
CLIP1-218ENST00000545889 PLEKHA8P1O95397 391 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 TTLL1O95922 423 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 GNG11P61952 73 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 C4orf50Q6ZRC1 276 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 SRLQ86TD4 932 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 JAKMIP2Q96AA8 810 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 LMCD1Q9NZU5 365 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 MTUS1Q9ULD2 1270 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 PCDHAC2Q9Y5I4 1007 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 CTIFO43310 598 aaKnown RBP9.44□□□□□ -0.9
CLIP1-218ENST00000545889 BRD1O95696 1058 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 CCDC175P0C221 793 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 MMP14P50281 582 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 SNAP25P60880 206 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 CCDC84Q86UT8 332 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-218ENST00000545889 RNF217Q8TC41 542 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 PAIP2Q9BPZ3 127 aaKnown RBP9.44□□□□□ -0.9
CLIP1-218ENST00000545889 HOXC10Q9NYD6 342 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 FBXO40Q9UH90 709 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 MAPK8IP1Q9UQF2 711 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 GPR75-ASB3A0A0A6YYF3 556 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 KIF1CO43896 1103 aaKnown RBP9.44□□□□□ -0.9
CLIP1-218ENST00000545889 MYL3P08590 195 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 PNMA6AP0CW24 399 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-218ENST00000545889 PCP11498 1178 aaKnown RBP9.44□□□□□ -0.9
CLIP1-218ENST00000545889 MAGEA9P43362 315 aa9.44□□□□□ -0.9
CLIP1-218ENST00000545889 CUL4AQ13619 759 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms