RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 EDIL3O43854 480 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 SHMT1P34896 483 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 KIF5AQ12840 1032 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 TUBB2AQ13885 445 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 RRAGAQ7L523 313 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 TUBB2BQ9BVA1 445 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 TTYH3Q9C0H2 523 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
SCAP-215ENST00000545718 HOXA10P31260 410 aaPredicted RBP17.37■□□□□ 0.37
SCAP-215ENST00000545718 FXR2P51116 673 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCAP-215ENST00000545718 VWA3BQ502W6 1294 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 CENPPQ6IPU0 288 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 PSMB7Q99436 277 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 PDE11AQ9HCR9 933 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 ZNF185O15231 689 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 ATP8B1O43520 1251 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 AKR1B10O60218 316 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 ZMYND10O75800 440 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 ENOX2Q16206 610 aaKnown RBP17.37■□□□□ 0.37
SCAP-215ENST00000545718 CACNA2D4Q7Z3S7 1137 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 SP8Q8IXZ3 490 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 ZNF622Q969S3 477 aaKnown RBP eCLIP17.37■□□□□ 0.371e-9■□□□□ 9.2
SCAP-215ENST00000545718 TEKT1Q969V4 418 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 GDAP1L1Q96MZ0 367 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 MMS19Q96T76 1030 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 RIC8AQ9NPQ8 531 aa17.37■□□□□ 0.37
SCAP-215ENST00000545718 E9PMD0 336 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 POTEB2H3BUK9 544 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 TRAF5O00463 557 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 KRT18P05783 430 aaKnown RBP17.36■□□□□ 0.37
SCAP-215ENST00000545718 PPP1R2P41236 205 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 AMPD2Q01433 879 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 CCDC40Q4G0X9 1142 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 ANKRD13CQ8N6S4 541 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 RETREG2Q8NC44 543 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 TRIM34Q9BYJ4 488 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 NLRC4Q9NPP4 1024 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 KIAA1024Q9UPX6 916 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 PHACTR2O75167 634 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 SLC1A4P43007 532 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 BEND6Q5SZJ8 279 aaPredicted RBP17.36■□□□□ 0.37
SCAP-215ENST00000545718 NEK11Q8NG66 645 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 TSG101Q99816 390 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
SCAP-215ENST00000545718 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 NPHP3-ACAD11A0A0J9YXS1 232 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 hCG_1984214I3L0E3 225 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 ZBTB5O15062 677 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 ZBTB22O15209 634 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 MEA1Q16626 185 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 ZNF713Q8N859 430 aaPredicted RBP17.35■□□□□ 0.37
SCAP-215ENST00000545718 CRACR2AQ9BSW2 395 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 BMP2KQ9NSY1 1161 aaPredicted RBP17.35■□□□□ 0.37
SCAP-215ENST00000545718 PCDHA1Q9Y5I3 950 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 STAT3P40763 770 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 TDRD12Q587J7 1177 aaKnown RBP17.35■□□□□ 0.37
SCAP-215ENST00000545718 HAS1Q92839 578 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 CCDC102AQ96A19 550 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 ERGIC2Q96RQ1 377 aa17.35■□□□□ 0.37
SCAP-215ENST00000545718 IFIH1Q9BYX4 1025 aaKnown RBP17.35■□□□□ 0.37
SCAP-215ENST00000545718 PVALEFA0A1B0GWK0 134 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 POTEB3A0JP26 581 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 POTECB2RU33 542 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 H3BQF6 201 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 PSMD14O00487 310 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 TNNT3P45378 269 aaPredicted RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 NAP1L1P55209 391 aaKnown RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 SEMA3FQ13275 785 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 MAN2A1Q16706 1144 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 USH1GQ495M9 461 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 POTEBQ6S5H4 581 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 HDXQ7Z353 690 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 TRAPPC11Q7Z392 1133 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 GUF1Q8N442 669 aaKnown RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 PANK4Q9NVE7 773 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 SWAP70Q9UH65 585 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 TAL1P17542 331 aaPredicted RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 EIF4A3P38919 411 aaKnown RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 PDIA5Q14554 519 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 GPATCH4Q5T3I0 446 aaKnown RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 MSL1Q68DK7 614 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 MYOCDQ8IZQ8 938 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 MSANTD4Q8NCY6 345 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 EHBP1Q8NDI1 1231 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 SECISBP2LQ93073 1101 aaKnown RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 CDK5RAP2Q96SN8 1893 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 QTRT2Q9H974 415 aaKnown RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 MLXIPQ9HAP2 919 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 LRRC53A6NM62 1247 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 EIF3CLB5ME19 914 aaKnown RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 FGFR1OPO95684 399 aaKnown RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 NOVP48745 357 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 DNA2P51530 1060 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 ARID5AQ03989 594 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 COASYQ13057 564 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 QRICH1Q2TAL8 776 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 HERC4Q5GLZ8 1057 aaPredicted RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 FAM26FQ5R3K3 315 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms