RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621	C1orf53	Q5VUE5	145 aa		18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	SLC26A6	Q9BXS9	759 aa		18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	GLT8D2	Q9H1C3	349 aa		18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	SLK	Q9H2G2	1235 aa	Predicted RBP	18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	SPC25	Q9HBM1	224 aa		18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	C6orf222	P0C671	652 aa	Predicted RBP	18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	PTGS1	P23219	599 aa		18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	KCNA10	Q16322	511 aa		18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	UBE2S	Q16763	222 aa		18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	PCNX4	Q63HM2	1172 aa		18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	XRRA1	Q6P2D8	792 aa		18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	FAM177A1	Q8N128	213 aa	Predicted RBP	18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	PCSK9	Q8NBP7	692 aa	Known RBP	18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	IL27	Q8NEV9	243 aa		18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	INPP4A	Q96PE3	977 aa	Predicted RBP	18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	SENP6	Q9GZR1	1112 aa	Predicted RBP	18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	SH3GLB2	Q9NR46	395 aa		18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	DDX41	Q9UJV9	622 aa	Known RBP	18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	STK36	Q9NRP7	1315 aa		18.37	■□□□□ 0.53
HMBS-222	ENST00000545621	MYH9	P35579	1960 aa	Known RBP	18.37	■□□□□ 0.53
HMBS-222	ENST00000545621		A0A1W2PQ45	241 aa	Predicted RBP	18.36	■□□□□ 0.53
HMBS-222	ENST00000545621		A0A1W2PQY0	241 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	SMCO2	A6NFE2	343 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	CPLX1	O14810	134 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	DEXI	O95424	95 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	LARGE1	O95461	756 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	TXN	P10599	105 aa	Known RBP	18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	ADCY7	P51828	1080 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	ACLY	P53396	1101 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	AKAP17A	Q02040	695 aa	Known RBP	18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	SSRP1	Q08945	709 aa	Known RBP	18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	LRRC26	Q2I0M4	334 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	GNAS	Q5JWF2	1037 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	KCNV1	Q6PIU1	500 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	CPLX2	Q6PUV4	134 aa	Known RBP	18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	SEPT14	Q6ZU15	432 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	TRIM22	Q8IYM9	498 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	GTF3C6	Q969F1	213 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	AP5M1	Q9H0R1	490 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	PCDHA6	Q9UN73	950 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	PCDHA8	Q9Y5H6	950 aa		18.36	■□□□□ 0.53
HMBS-222	ENST00000545621	ELP1	O95163	1332 aa		18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	DYNC1LI2	O43237	492 aa	Predicted RBP	18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	CTDNEP1	O95476	244 aa		18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	FOS	P01100	380 aa	Predicted RBP	18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	ASGR1	P07306	291 aa		18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	TGFB3	P10600	412 aa		18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	MYCL	P12524	364 aa	Predicted RBP	18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	ICAM3	P32942	547 aa		18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	AP3B2	Q13367	1082 aa		18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	FSCN1	Q16658	493 aa	Known RBP	18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	SLC39A5	Q6ZMH5	540 aa		18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	NOL8	Q76FK4	1167 aa	Known RBP	18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	EMID1	Q96A84	441 aa	Predicted RBP	18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	TBC1D32	Q96NH3	1257 aa		18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	BACH2	Q9BYV9	841 aa		18.35	■□□□□ 0.53
HMBS-222	ENST00000545621	UPF2	Q9HAU5	1272 aa	Known RBP	18.35	■□□□□ 0.53
HMBS-222	ENST00000545621		A6NJR5	290 aa		18.34	■□□□□ 0.53
HMBS-222	ENST00000545621	SPDYE3	A6NKU9	549 aa		18.34	■□□□□ 0.53
HMBS-222	ENST00000545621	PPFIA3	O75145	1194 aa		18.34	■□□□□ 0.53
HMBS-222	ENST00000545621	CDKL5	O76039	1030 aa		18.34	■□□□□ 0.53
HMBS-222	ENST00000545621	BEX3	Q00994	111 aa		18.34	■□□□□ 0.53
HMBS-222	ENST00000545621	ARHGAP1	Q07960	439 aa		18.34	■□□□□ 0.53
HMBS-222	ENST00000545621	ST3GAL1	Q11201	340 aa		18.34	■□□□□ 0.53
HMBS-222	ENST00000545621	CCDC148	Q8NFR7	591 aa		18.34	■□□□□ 0.53
HMBS-222	ENST00000545621	CRYGN	Q8WXF5	182 aa		18.34	■□□□□ 0.53
HMBS-222	ENST00000545621	COPS5	Q92905	334 aa		18.34	■□□□□ 0.53
HMBS-222	ENST00000545621	ADAMTS3	O15072	1205 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	MYCN	P04198	464 aa	Predicted RBP	18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	GNA11	P29992	359 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	SEMA3F	Q13275	785 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	RABEP1	Q15276	862 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	LY6K	Q17RY6	165 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	MCTP2	Q6DN12	878 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	OR6J1	Q8NGC5	347 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	DPF3	Q92784	378 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	FERMT2	Q96AC1	680 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	ANO3	Q9BYT9	981 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	C6orf50	Q9HD87	102 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	VPS54	Q9P1Q0	977 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	LIMCH1	Q9UPQ0	1083 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	MRVI1	Q9Y6F6	885 aa		18.33	■□□□□ 0.52
HMBS-222	ENST00000545621	SPATA31C2	B4DYI2	1134 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	EVI5	O60447	810 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	GH1	P01241	217 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	SREBF1	P36956	1147 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	CPT1A	P50416	773 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	SP2	Q02086	613 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	NPY5R	Q15761	445 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	GNPTAB	Q3T906	1256 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	PRPF38B	Q5VTL8	546 aa	Known RBP	18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	NECAB1	Q8N987	351 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	GLT1D1	Q96MS3	346 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	EHMT1	Q9H9B1	1298 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	UBIAD1	Q9Y5Z9	338 aa		18.32	■□□□□ 0.52
HMBS-222	ENST00000545621	FIBP	O43427	364 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	ZEB2	O60315	1214 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	CABYR	O75952	493 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	HOXD8	P13378	290 aa	Predicted RBP	18.31	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms