RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 KIR2DL1P43626 348 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-222ENST00000545308 KIR2DL2P43627 348 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-222ENST00000545308 GFRA1P56159 465 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 EXOSC10Q01780 885 aaKnown RBP5.6□□□□□ -1.51
SNHG1-222ENST00000545308 ZNF460Q14592 562 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 PPP2R5DQ14738 602 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 PCBP1Q15365 356 aaKnown RBP eCLIP5.6□□□□□ -1.51
SNHG1-222ENST00000545308 ADGRF1Q5T601 910 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 GTF2IRD2BQ6EKJ0 949 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 GTF2IRD2Q86UP8 949 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 PRDM14Q9GZV8 571 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 CRTAC1Q9NQ79 661 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 NDOR1Q9UHB4 597 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 MBD1Q9UIS9 605 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-222ENST00000545308 FBXL21Q9UKT6 434 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 PCDHB12Q9Y5F1 795 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 FHOD1Q9Y613 1164 aa5.6□□□□□ -1.51
SNHG1-222ENST00000545308 WASHC2CQ9Y4E1 1318 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 FOXD2O60548 495 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-222ENST00000545308 TRIM13O60858 407 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 USP2O75604 605 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-222ENST00000545308 GABREP78334 506 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 SRSF3P84103 164 aaKnown RBP5.59□□□□□ -1.51
SNHG1-222ENST00000545308 CCDC181Q5TID7 509 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 POMZP3Q6PJE2 187 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 WAPLQ7Z5K2 1190 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 TMEM145Q8NBT3 493 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 DAGLBQ8NCG7 672 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 C1orf159Q96HA4 380 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 MAP6Q96JE9 813 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 SIGLEC10Q96LC7 697 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 FOXP3Q9BZS1 431 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 MTFR1LQ9H019 292 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 NKX2-4Q9H2Z4 354 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 NOL6Q9H6R4 1146 aaKnown RBP5.59□□□□□ -1.51
SNHG1-222ENST00000545308 MCM8Q9UJA3 840 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 FAN1Q9Y2M0 1017 aa5.59□□□□□ -1.51
SNHG1-222ENST00000545308 TNPO3Q9Y5L0 923 aaKnown RBP5.59□□□□□ -1.51
SNHG1-222ENST00000545308 ASXL2Q76L83 1435 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 PDS5BQ9NTI5 1447 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 TMEM82A0PJX8 343 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 VAMP4O75379 141 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 PI3P19957 117 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 POU3F2P20265 443 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-222ENST00000545308 PMLP29590 882 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 PCBP3P57721 371 aaKnown RBP5.58□□□□□ -1.52
SNHG1-222ENST00000545308 MAP4K2Q12851 820 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 SLC14A2Q15849 920 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 PRSS53Q2L4Q9 553 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 NOL9Q5SY16 702 aaKnown RBP5.58□□□□□ -1.52
SNHG1-222ENST00000545308 SLC35F1Q5T1Q4 408 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 DENND5AQ6IQ26 1287 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 PKN3Q6P5Z2 889 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 CEP128Q6ZU80 1094 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 LHFPL2Q6ZUX7 228 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 FMNL3Q8IVF7 1028 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 FIBCD1Q8N539 461 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 ZNF655Q8N720 491 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-222ENST00000545308 LINC00116Q8NCU8 138 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 PANK1Q8TE04 598 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 LEO1Q8WVC0 666 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-222ENST00000545308 TCTN2Q96GX1 697 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 CEP89Q96ST8 783 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 SLC52A1Q9NWF4 448 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 SIRT5Q9NXA8 310 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 GFOD1Q9NXC2 390 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 TCFL5Q9UL49 500 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 MINPP1Q9UNW1 487 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 DIS3Q9Y2L1 958 aaKnown RBP5.58□□□□□ -1.52
SNHG1-222ENST00000545308 IRAK3Q9Y616 596 aa5.58□□□□□ -1.52
SNHG1-222ENST00000545308 SSU72P8A0A1W2PR75 194 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 ALG1L2C9J202 215 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 SCG5P05408 212 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 SNRPB2P08579 225 aaKnown RBP5.57□□□□□ -1.52
SNHG1-222ENST00000545308 HOXC12P31275 282 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 GRB10Q13322 594 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 NFIXQ14938 502 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 SEPT7Q16181 437 aaKnown RBP5.57□□□□□ -1.52
SNHG1-222ENST00000545308 DDX46Q7L014 1031 aaKnown RBP5.57□□□□□ -1.52
SNHG1-222ENST00000545308 TMC3Q7Z5M5 1100 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 PPM1KQ8N3J5 372 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 CRACR2BQ8N4Y2 399 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-222ENST00000545308 KREMEN2Q8NCW0 462 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 ATL2Q8NHH9 583 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 KCTD13Q8WZ19 329 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 PTPRN2Q92932 1015 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 DACT3Q96B18 629 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-222ENST00000545308 ZDHHC15Q96MV8 337 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 RTEL1Q9NZ71 1219 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 GPR55Q9Y2T6 319 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-222ENST00000545308 TRAF6Q9Y4K3 522 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 EID1Q9Y6B2 187 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 SMARCA2P51531 1590 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 LAMC3Q9Y6N6 1575 aa5.57□□□□□ -1.52
SNHG1-222ENST00000545308 TCRBV16S1A1N1A0A5B0 115 aa5.56□□□□□ -1.52
SNHG1-222ENST00000545308 H0Y8X5 98 aa5.56□□□□□ -1.52
SNHG1-222ENST00000545308 N4BP3O15049 544 aa5.56□□□□□ -1.52
SNHG1-222ENST00000545308 OPA1O60313 960 aa5.56□□□□□ -1.52
SNHG1-222ENST00000545308 EFCAB14O75071 495 aa5.56□□□□□ -1.52
SNHG1-222ENST00000545308 RASGRP1O95267 797 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms