RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 ARHGAP4P98171 946 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 GNL2Q13823 731 aaKnown RBP13.4□□□□□ -0.26
SNHG1-221ENST00000544983 MOXD1Q6UVY6 613 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 NIPA1Q7RTP0 329 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 NLRX1Q86UT6 975 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 SH3TC2Q8TF17 1288 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 SCFD2Q8WU76 684 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 CRYGNQ8WXF5 182 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 ZNF333Q96JL9 665 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 INPP4AQ96PE3 977 aaPredicted RBP13.4□□□□□ -0.26
SNHG1-221ENST00000544983 GJB4Q9NTQ9 266 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 DAXXQ9UER7 740 aaPredicted RBP13.4□□□□□ -0.26
SNHG1-221ENST00000544983 FAM184BQ9ULE4 1060 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 HTTP42858 3142 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 RBM47A0AV96 593 aaKnown RBP13.39□□□□□ -0.27
SNHG1-221ENST00000544983 BTBD18B2RXH4 712 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 MYCLP12524 364 aaPredicted RBP13.39□□□□□ -0.27
SNHG1-221ENST00000544983 AKR1A1P14550 325 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 GCFC2P16383 781 aaKnown RBP13.39□□□□□ -0.27
SNHG1-221ENST00000544983 CIITAP33076 1130 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 TTLL4Q14679 1199 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 CEP55Q53EZ4 464 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 TNFRSF25Q93038 417 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 GPRASP2Q96D09 838 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 KATNBL1Q9H079 304 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 TMEM260Q9NX78 707 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 Q9Y3F1 56 aa13.39□□□□□ -0.27
SNHG1-221ENST00000544983 MCM3APO60318 1980 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 FIBPO43427 364 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 DTNBO60941 627 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 ZNF865P0CJ78 1059 aaPredicted RBP13.38□□□□□ -0.27
SNHG1-221ENST00000544983 SYT1P21579 422 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 ICAM3P32942 547 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 ZNF76P36508 570 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 MRPS9P82933 396 aaKnown RBP13.38□□□□□ -0.27
SNHG1-221ENST00000544983 SETQ01105 290 aaPredicted RBP13.38□□□□□ -0.27
SNHG1-221ENST00000544983 ORC2Q13416 577 aaPredicted RBP13.38□□□□□ -0.27
SNHG1-221ENST00000544983 NOSTRINQ8IVI9 506 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 GIMAP8Q8ND71 665 aaPredicted RBP13.38□□□□□ -0.27
SNHG1-221ENST00000544983 IL31RAQ8NI17 732 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 RASGRP4Q8TDF6 673 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 OXER1Q8TDS5 423 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 SENP7Q9BQF6 1050 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 ZHX1Q9UKY1 873 aaPredicted RBP13.38□□□□□ -0.27
SNHG1-221ENST00000544983 UBIAD1Q9Y5Z9 338 aa13.38□□□□□ -0.27
SNHG1-221ENST00000544983 CYP3A7-CYP3A51PA0A087WV96 503 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 MEIS1O00470 390 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 DUSP11O75319 330 aaKnown RBP13.37□□□□□ -0.27
SNHG1-221ENST00000544983 RARBP10826 455 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 CCL5P13501 91 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 CYP3A7P24462 503 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 GUCY1B3Q02153 619 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 TNFAIP2Q03169 654 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 NR5A1Q13285 461 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 CCDC144BQ3MJ40 725 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 DUSP28Q4G0W2 176 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 PPP4R3AQ6IN85 833 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 TAPT1Q6NXT6 567 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 PIK3AP1Q6ZUJ8 805 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 BRAPQ7Z569 592 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 NEK8Q86SG6 692 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 FBXO16Q8IX29 292 aaPredicted RBP13.37□□□□□ -0.27
SNHG1-221ENST00000544983 MXRA8Q9BRK3 442 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 WDR11Q9BZH6 1224 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■□□□□ 8.4
SNHG1-221ENST00000544983 JADE2Q9NQC1 790 aa13.37□□□□□ -0.27
SNHG1-221ENST00000544983 PAK6Q9NQU5 681 aaPredicted RBP13.37□□□□□ -0.27
SNHG1-221ENST00000544983 DDX20Q9UHI6 824 aaKnown RBP13.37□□□□□ -0.27
SNHG1-221ENST00000544983 NOL7Q9UMY1 257 aaKnown RBP13.37□□□□□ -0.27
SNHG1-221ENST00000544983 SPATA31C2B4DYI2 1134 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 STX6O43752 255 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 RGS20O76081 388 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 GJB1P08034 283 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 CNGA1P29973 690 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 FOSBP53539 338 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 TRIM32Q13049 653 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 MTMR1Q13613 665 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 NEDD9Q14511 834 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 INF2Q27J81 1249 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 MCTP1Q6DN14 999 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 SEPT14Q6ZU15 432 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 EEPD1Q7L9B9 569 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 TRPV1Q8NER1 839 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 PGBD1Q96JS3 809 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 TMEM106CQ9BVX2 250 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 RNF208Q9H0X6 261 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 ZSCAN16Q9H4T2 348 aaPredicted RBP13.36□□□□□ -0.27
SNHG1-221ENST00000544983 SPC25Q9HBM1 224 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 MRVI1Q9Y6F6 885 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 KIAA1217Q5T5P2 1943 aa13.36□□□□□ -0.27
SNHG1-221ENST00000544983 MYH7BA7E2Y1 1941 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 KIAA0100Q14667 2235 aaKnown RBP13.35□□□□□ -0.27
SNHG1-221ENST00000544983 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
SNHG1-221ENST00000544983 ADAMTS3O15072 1205 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 TXNP10599 105 aaKnown RBP13.35□□□□□ -0.27
SNHG1-221ENST00000544983 ITGB5P18084 799 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 CCND3P30281 292 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms