RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 PTPDC1A2A3K4 754 aa11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 SGPL1O95470 568 aa11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 PDIA3P30101 505 aaKnown RBP11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 CDC27P30260 824 aa11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 RGS19P49795 217 aa11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 HSD17B4P51659 736 aa11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 RPS6P62753 249 aaKnown RBP11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 CNTN2Q02246 1040 aa11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 SLC30A10Q6XR72 485 aa11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 RAB11FIP4Q86YS3 637 aa11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 UPF2Q9HAU5 1272 aaKnown RBP11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 CNPY2Q9Y2B0 182 aa11.18□□□□□ -0.62
RIMKLB-212ENST00000544257 hCG_1984214I3L0E3 225 aa11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 OPLAHO14841 1288 aa11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 SEPT4O43236 478 aa11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 SNAI1O95863 264 aaPredicted RBP11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 CCND3P30281 292 aaPredicted RBP11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 ALDH5A1P51649 535 aaPredicted RBP11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 SOX10P56693 466 aa11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 CMTR1Q8N1G2 835 aaKnown RBP11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 ZNF713Q8N859 430 aaPredicted RBP11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 TRPV1Q8NER1 839 aa11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 U2AF1L4Q8WU68 220 aaKnown RBP11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 MPHOSPH6Q99547 160 aaKnown RBP11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 C22orf23Q9BZE7 217 aa11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 ABHD16BQ9H3Z7 469 aa11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 NAP1L2Q9ULW6 460 aaPredicted RBP11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 BAZ2BQ9UIF8 2168 aaKnown RBP11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 ASTN1O14525 1302 aa11.17□□□□□ -0.62
RIMKLB-212ENST00000544257 B4DLN1 442 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 MYCP01106 439 aaPredicted RBP11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 ZNF865P0CJ78 1059 aaPredicted RBP11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 CALML3P27482 149 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 ADD1P35611 737 aaKnown RBP11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 MRPL12P52815 198 aaKnown RBP11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 ARMCX2Q7L311 632 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 ANKLE1Q8NAG6 615 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 SYTL5Q8TDW5 730 aaPredicted RBP11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 DEFB118Q96PH6 123 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 DDX20Q9UHI6 824 aaKnown RBP11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 OGDHLQ9ULD0 1010 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 LRRC37A2A6NM11 1700 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 KIAA0100Q14667 2235 aaKnown RBP11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 PIK3CDO00329 1044 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 IFNAR1P17181 557 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 EDNRBP24530 442 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 NTRK3Q16288 839 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 SWT1Q5T5J6 900 aaKnown RBP11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 SHISA4Q96DD7 197 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 IWS1Q96ST2 819 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 KIF2CQ99661 725 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 RNF26Q9BY78 433 aaPredicted RBP11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 KATNBL1Q9H079 304 aa11.16□□□□□ -0.62
RIMKLB-212ENST00000544257 FRMPD3Q5JV73 1810 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 GCOM1H8Y6P7 765 aaPredicted RBP11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 PRPF3O43395 683 aaKnown RBP11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 CFBP00751 764 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 POLR2MP0CAP2 368 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 AKR1A1P14550 325 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 EN2P19622 333 aaPredicted RBP11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 NEK4P51957 841 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 AK2P54819 239 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 ACVR2BQ13705 512 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 CPLX2Q6PUV4 134 aaKnown RBP11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 CCDC82Q8N4S0 544 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 NSUN6Q8TEA1 469 aaKnown RBP11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 PIBF1Q8WXW3 757 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 TBC1D5Q92609 795 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 VTA1Q9NP79 307 aa11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.62
RIMKLB-212ENST00000544257 BRCA2P51587 3418 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 FRMPD4Q14CM0 1322 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 PFKFB2O60825 505 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 TFRCP02786 760 aaKnown RBP11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 CNGA1P29973 690 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 PRAMEF19Q5SWL8 479 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 HEATR3Q7Z4Q2 680 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 PURBQ96QR8 312 aaKnown RBP11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 RMDN3Q96TC7 470 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 BACH2Q9BYV9 841 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 GLT8D2Q9H1C3 349 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 BARHL2Q9NY43 387 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 COL20A1Q9P218 1284 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 FAM184BQ9ULE4 1060 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 TPCN1Q9ULQ1 816 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 MCM3APO60318 1980 aa11.14□□□□□ -0.63
RIMKLB-212ENST00000544257 CPLX1O14810 134 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 CDKL5O76039 1030 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 SCG2P13521 617 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 CCT2P78371 535 aaKnown RBP11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 AKAP17AQ02040 695 aaKnown RBP11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 PDE4DQ08499 809 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 RABEP1Q15276 862 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 WWC2Q6AWC2 1192 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 UBE2Q1Q7Z7E8 422 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 TRIM22Q8IYM9 498 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 FAM177A1Q8N128 213 aaPredicted RBP11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 CUL5Q93034 780 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms