RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TTF1Q15361 905 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-207ENST00000544052 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 RNF219Q5W0B1 726 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-207ENST00000544052 TMPRSS7Q7RTY8 843 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 SMC1BQ8NDV3 1235 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 MTMR8Q96EF0 704 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 GPR101Q96P66 508 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-207ENST00000544052 ORAI3Q9BRQ5 295 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 PIM2Q9P1W9 311 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 EBF1Q9UH73 591 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 CBLCQ9ULV8 474 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 EID1Q9Y6B2 187 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 TRBV23OR9-2A0A075B6M9 112 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 TMEM265A0A087WTH1 108 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 PPP1R11O60927 126 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-207ENST00000544052 FOSL1P15407 271 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 GRK2P25098 689 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 GRK3P35626 688 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 IL2P60568 153 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 LSAMPQ13449 338 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 SART3Q15020 963 aaKnown RBP5.05□□□□□ -1.6
SCFD1-207ENST00000544052 AOC3Q16853 763 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 OVCH1Q7RTY7 1134 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 NLRP10Q86W26 655 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 ANKLE2Q86XL3 938 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 PCMTD2Q9NV79 361 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 H2AFY2Q9P0M6 372 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-207ENST00000544052 GULP1Q9UBP9 304 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 ZNF281Q9Y2X9 895 aa5.05□□□□□ -1.6
SCFD1-207ENST00000544052 TIMM13Q9Y5L4 95 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-207ENST00000544052 GSC2O15499 205 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 FKBP9O95302 570 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 FPR2P25090 351 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 MECP2P51608 486 aaKnown RBP5.04□□□□□ -1.6
SCFD1-207ENST00000544052 ST5P78524 1137 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 FKBP9P1Q75LS8 142 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 CEP68Q76N32 757 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 SPATS2Q86XZ4 545 aaKnown RBP5.04□□□□□ -1.6
SCFD1-207ENST00000544052 TEX2Q8IWB9 1127 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 CNTD1Q8N815 330 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 CHTF18Q8WVB6 975 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 TSR2Q969E8 191 aaKnown RBP5.04□□□□□ -1.6
SCFD1-207ENST00000544052 FCRL2Q96LA5 508 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-207ENST00000544052 CABP5Q9NP86 173 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 CATSPERZQ9NTU4 200 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 SPTLC3Q9NUV7 552 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 THG1LQ9NWX6 298 aaKnown RBP5.04□□□□□ -1.6
SCFD1-207ENST00000544052 CLDND1Q9NY35 253 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 SNX11Q9Y5W9 270 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 PTPDC1A2A3K4 754 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 FAM47E-STBD1D6RA91 191 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 KCNK3O14649 394 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 WNT9AO14904 365 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 MYO1BO43795 1136 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 ZEB2O60315 1214 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 GAS7O60861 476 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 TGFB1P01137 390 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 PDE6AP16499 860 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 ATP2A2P16615 1042 aaKnown RBP5.04□□□□□ -1.6
SCFD1-207ENST00000544052 CPSF6Q16630 551 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCFD1-207ENST00000544052 CYP2R1Q6VVX0 501 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 NECAB2Q7Z6G3 386 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 OSTM1Q86WC4 334 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 FBXW5Q969U6 566 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 HRASLS5Q96KN8 279 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 VTA1Q9NP79 307 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 EMC7Q9NPA0 242 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 ZKSCAN5Q9Y2L8 839 aa5.04□□□□□ -1.6
SCFD1-207ENST00000544052 WTIPA6NIX2 430 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-207ENST00000544052 RPL11P62913 178 aaKnown RBP5.03□□□□□ -1.6
SCFD1-207ENST00000544052 MCL1Q07820 350 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 BNIP3Q12983 259 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 FAM47CQ5HY64 1035 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 MCTP1Q6DN14 999 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 KIF18BQ86Y91 864 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 CHST14Q8NCH0 376 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 ASB11Q8WXH4 323 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 TMEM169Q96HH4 297 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 MARCH2Q9P0N8 246 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 B4GALT6Q9UBX8 382 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 TRHDEQ9UKU6 1024 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 COL6A2P12110 1019 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 YBX3P16989 372 aaKnown RBP eCLIP5.03□□□□□ -1.65e-7■■■□□ 14.6
SCFD1-207ENST00000544052 LRRC41Q15345 812 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 C16orf59Q7L2K0 433 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 C2orf69Q8N8R5 385 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 HHIPL1Q96JK4 782 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 JMJD8Q96S16 334 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 YIPF4Q9BSR8 244 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 G6PC3Q9BUM1 346 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 CARS2Q9HA77 564 aaKnown RBP5.03□□□□□ -1.6
SCFD1-207ENST00000544052 FBLN5Q9UBX5 448 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 FAN1Q9Y2M0 1017 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 RWDD3Q9Y3V2 267 aa5.03□□□□□ -1.6
SCFD1-207ENST00000544052 TCRBV5S4A2TA0A5A2 114 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 FADS2P1A8MWK0 482 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 GABRDO14764 452 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 NPHS1O60500 1241 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 PRKD3O94806 890 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 KRT15P19012 456 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms