RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 Q6ZUG5 572 aa22.03■■□□□ 1.12
SPPL3-208ENST00000543854 SMARCC2Q8TAQ2 1214 aa22.03■■□□□ 1.12
SPPL3-208ENST00000543854 MRVI1Q9Y6F6 885 aa22.03■■□□□ 1.12
SPPL3-208ENST00000543854 FRMPD4Q14CM0 1322 aa22.03■■□□□ 1.12
SPPL3-208ENST00000543854 hCG_1642624A0A1W2PR95 340 aa22.02■■□□□ 1.12
SPPL3-208ENST00000543854 GH1P01241 217 aa22.02■■□□□ 1.12
SPPL3-208ENST00000543854 MYL3P08590 195 aa22.02■■□□□ 1.12
SPPL3-208ENST00000543854 RAG1P15918 1043 aa22.02■■□□□ 1.12
SPPL3-208ENST00000543854 RPS6KB1P23443 525 aa22.02■■□□□ 1.12
SPPL3-208ENST00000543854 PURAQ00577 322 aaKnown RBP22.02■■□□□ 1.12
SPPL3-208ENST00000543854 HEATR3Q7Z4Q2 680 aa22.02■■□□□ 1.12
SPPL3-208ENST00000543854 FAM126BQ8IXS8 530 aa22.02■■□□□ 1.12
SPPL3-208ENST00000543854 IL31RAQ8NI17 732 aa22.02■■□□□ 1.12
SPPL3-208ENST00000543854 BADQ92934 168 aa22.02■■□□□ 1.12
SPPL3-208ENST00000543854 SEZ6LQ9BYH1 1024 aa22.02■■□□□ 1.12
SPPL3-208ENST00000543854 A6NJR5 290 aa22.01■■□□□ 1.11
SPPL3-208ENST00000543854 PIK3CDO00329 1044 aa22.01■■□□□ 1.11
SPPL3-208ENST00000543854 KPNA6O60684 536 aa22.01■■□□□ 1.11
SPPL3-208ENST00000543854 PSMC6P62333 389 aa22.01■■□□□ 1.11
SPPL3-208ENST00000543854 LY6KQ17RY6 165 aa22.01■■□□□ 1.11
SPPL3-208ENST00000543854 VSIG10LQ86VR7 867 aa22.01■■□□□ 1.11
SPPL3-208ENST00000543854 BRF1Q92994 677 aa22.01■■□□□ 1.11
SPPL3-208ENST00000543854 MTG1Q9BT17 334 aaPredicted RBP22.01■■□□□ 1.11
SPPL3-208ENST00000543854 TBX21Q9UL17 535 aa22.01■■□□□ 1.11
SPPL3-208ENST00000543854 METAP2P50579 478 aaKnown RBP eCLIP22■■□□□ 1.11
SPPL3-208ENST00000543854 ARHGAP1Q07960 439 aa22■■□□□ 1.11
SPPL3-208ENST00000543854 APOBRQ0VD83 1088 aa22■■□□□ 1.11
SPPL3-208ENST00000543854 KCNV1Q6PIU1 500 aa22■■□□□ 1.11
SPPL3-208ENST00000543854 USP17L6PQ6QN14 398 aa22■■□□□ 1.11
SPPL3-208ENST00000543854 SLC43A3Q8NBI5 491 aa22■■□□□ 1.11
SPPL3-208ENST00000543854 PSTPIP2Q9H939 334 aa22■■□□□ 1.11
SPPL3-208ENST00000543854 DDX41Q9UJV9 622 aaKnown RBP22■■□□□ 1.11
SPPL3-208ENST00000543854 CCDC196A0A1B0GTZ2 297 aa21.99■■□□□ 1.11
SPPL3-208ENST00000543854 ITGB8P26012 769 aa21.99■■□□□ 1.11
SPPL3-208ENST00000543854 GNPTABQ3T906 1256 aa21.99■■□□□ 1.11
SPPL3-208ENST00000543854 FBXL16Q8N461 479 aa21.99■■□□□ 1.11
SPPL3-208ENST00000543854 AFG1LQ8WV93 481 aa21.99■■□□□ 1.11
SPPL3-208ENST00000543854 GPKOWQ92917 476 aaPredicted RBP eCLIP21.99■■□□□ 1.11
SPPL3-208ENST00000543854 EMID1Q96A84 441 aaPredicted RBP21.99■■□□□ 1.11
SPPL3-208ENST00000543854 USP26Q9BXU7 913 aa21.99■■□□□ 1.11
SPPL3-208ENST00000543854 SCN10AQ9Y5Y9 1956 aa21.99■■□□□ 1.11
SPPL3-208ENST00000543854 GRIN2DO15399 1336 aa21.99■■□□□ 1.11
SPPL3-208ENST00000543854 NID2Q14112 1375 aa21.99■■□□□ 1.11
SPPL3-208ENST00000543854 MEIS2O14770 477 aa21.98■■□□□ 1.11
SPPL3-208ENST00000543854 STAM2O75886 525 aa21.98■■□□□ 1.11
SPPL3-208ENST00000543854 MMP3P08254 477 aa21.98■■□□□ 1.11
SPPL3-208ENST00000543854 FUT2Q10981 343 aa21.98■■□□□ 1.11
SPPL3-208ENST00000543854 PPP1R18Q6NYC8 613 aa21.98■■□□□ 1.11
SPPL3-208ENST00000543854 SZT2Q5T011 3432 aa21.98■■□□□ 1.11
SPPL3-208ENST00000543854 RGS20O76081 388 aa21.97■■□□□ 1.11
SPPL3-208ENST00000543854 CD4P01730 458 aa21.97■■□□□ 1.11
SPPL3-208ENST00000543854 CDC27P30260 824 aa21.97■■□□□ 1.11
SPPL3-208ENST00000543854 FPGSQ05932 587 aa21.97■■□□□ 1.11
SPPL3-208ENST00000543854 LAMC2Q13753 1193 aa21.97■■□□□ 1.11
SPPL3-208ENST00000543854 WWC2Q6AWC2 1192 aa21.97■■□□□ 1.11
SPPL3-208ENST00000543854 RUFY3Q7L099 469 aa21.97■■□□□ 1.11
SPPL3-208ENST00000543854 DHX37Q8IY37 1157 aaKnown RBP21.97■■□□□ 1.11
SPPL3-208ENST00000543854 AGXT2Q9BYV1 514 aa21.97■■□□□ 1.11
SPPL3-208ENST00000543854 FAM217BQ9NTX9 383 aaPredicted RBP21.97■■□□□ 1.11
SPPL3-208ENST00000543854 hCG_1984214I3L0E3 225 aa21.96■■□□□ 1.11
SPPL3-208ENST00000543854 TIMP1P01033 207 aa21.96■■□□□ 1.11
SPPL3-208ENST00000543854 TGFB3P10600 412 aa21.96■■□□□ 1.11
SPPL3-208ENST00000543854 NAPAP54920 295 aa21.96■■□□□ 1.11
SPPL3-208ENST00000543854 LRIT3Q3SXY7 679 aa21.96■■□□□ 1.11
SPPL3-208ENST00000543854 FAM47CQ5HY64 1035 aa21.96■■□□□ 1.11
SPPL3-208ENST00000543854 XRRA1Q6P2D8 792 aa21.96■■□□□ 1.11
SPPL3-208ENST00000543854 ZNF713Q8N859 430 aaPredicted RBP21.96■■□□□ 1.11
SPPL3-208ENST00000543854 PPTC7Q8NI37 304 aa21.96■■□□□ 1.11
SPPL3-208ENST00000543854 ALDH8A1Q9H2A2 487 aaPredicted RBP21.96■■□□□ 1.11
SPPL3-208ENST00000543854 ZSWIM6Q9HCJ5 1215 aa21.96■■□□□ 1.11
SPPL3-208ENST00000543854 CYP46A1Q9Y6A2 500 aa21.96■■□□□ 1.11
SPPL3-208ENST00000543854 V9GY48 417 aaPredicted RBP21.96■■□□□ 1.11
SPPL3-208ENST00000543854 SPDYE3A6NKU9 549 aa21.95■■□□□ 1.1
SPPL3-208ENST00000543854 B4GALT4O60513 344 aa21.95■■□□□ 1.1
SPPL3-208ENST00000543854 UBA1P22314 1058 aaKnown RBP21.95■■□□□ 1.1
SPPL3-208ENST00000543854 MRPS9P82933 396 aaKnown RBP21.95■■□□□ 1.1
SPPL3-208ENST00000543854 DGKDQ16760 1214 aa21.95■■□□□ 1.1
SPPL3-208ENST00000543854 UBE2SQ16763 222 aa21.95■■□□□ 1.1
SPPL3-208ENST00000543854 PCNX4Q63HM2 1172 aa21.95■■□□□ 1.1
SPPL3-208ENST00000543854 ZFP91Q96JP5 570 aaPredicted RBP21.95■■□□□ 1.1
SPPL3-208ENST00000543854 INPP4AQ96PE3 977 aaPredicted RBP21.95■■□□□ 1.1
SPPL3-208ENST00000543854 PPP1R12CQ9BZL4 782 aa21.95■■□□□ 1.1
SPPL3-208ENST00000543854 SOX1O00570 391 aaPredicted RBP21.94■■□□□ 1.1
SPPL3-208ENST00000543854 FIBPO43427 364 aa21.94■■□□□ 1.1
SPPL3-208ENST00000543854 GGPS1O95749 300 aa21.94■■□□□ 1.1
SPPL3-208ENST00000543854 ADD1P35611 737 aaKnown RBP21.94■■□□□ 1.1
SPPL3-208ENST00000543854 NFRKBQ6P4R8 1299 aa21.94■■□□□ 1.1
SPPL3-208ENST00000543854 TEX2Q8IWB9 1127 aa21.94■■□□□ 1.1
SPPL3-208ENST00000543854 TM6SF1Q9BZW5 370 aa21.94■■□□□ 1.1
SPPL3-208ENST00000543854 TRPV6Q9H1D0 765 aa21.94■■□□□ 1.1
SPPL3-208ENST00000543854 HIPK3Q9H422 1215 aa21.94■■□□□ 1.1
SPPL3-208ENST00000543854 EHMT1Q9H9B1 1298 aa21.94■■□□□ 1.1
SPPL3-208ENST00000543854 MYH7BA7E2Y1 1941 aa21.94■■□□□ 1.1
SPPL3-208ENST00000543854 LAMA2P24043 3122 aaKnown RBP21.93■■□□□ 1.1
SPPL3-208ENST00000543854 STXBP3O00186 592 aa21.93■■□□□ 1.1
SPPL3-208ENST00000543854 SUPT20HL2P0C7V6 817 aa21.93■■□□□ 1.1
SPPL3-208ENST00000543854 ADCY7P51828 1080 aa21.93■■□□□ 1.1
SPPL3-208ENST00000543854 CHMP4BP1P59074 171 aa21.93■■□□□ 1.1
SPPL3-208ENST00000543854 NBPF20Q3BBV1 942 aa21.93■■□□□ 1.1
SPPL3-208ENST00000543854 CELF3Q5SZQ8 465 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms