RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 MEA1Q16626 185 aa17.94■□□□□ 0.46
SCNN1A-221ENST00000543768 NOC4LQ9BVI4 516 aaKnown RBP17.94■□□□□ 0.46
SCNN1A-221ENST00000543768 NUP58Q9BVL2 599 aa17.94■□□□□ 0.46
SCNN1A-221ENST00000543768 GLT8D2Q9H1C3 349 aa17.94■□□□□ 0.46
SCNN1A-221ENST00000543768 HYIQ5T013 277 aa17.94■□□□□ 0.46
SCNN1A-221ENST00000543768 RETREG2Q8NC44 543 aa17.94■□□□□ 0.46
SCNN1A-221ENST00000543768 DNAJC19Q96DA6 116 aa17.94■□□□□ 0.46
SCNN1A-221ENST00000543768 ERGIC2Q96RQ1 377 aa17.94■□□□□ 0.46
SCNN1A-221ENST00000543768 EPC1Q9H2F5 836 aa17.94■□□□□ 0.46
SCNN1A-221ENST00000543768 CHRNA5P30532 468 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 USP11P51784 963 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 ICA1Q05084 483 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 TMEM179Q6ZVK1 233 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 C7orf43Q8WVR3 580 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 LRRC27Q9C0I9 530 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 CDC23Q9UJX2 597 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 F5H6K3 240 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 MEIS2O14770 477 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 IDEP14735 1019 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 TRIM21P19474 475 aaKnown RBP17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 KLRC3Q07444 240 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 PSMD2Q13200 908 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 AOC3Q16853 763 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 NAP1L4Q99733 375 aaKnown RBP17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 ANO3Q9BYT9 981 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 KCNMB3Q9NPA1 279 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 MYO1AQ9UBC5 1043 aa17.93■□□□□ 0.46
SCNN1A-221ENST00000543768 CYP3A7-CYP3A51PA0A087WV96 503 aa17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 MARCH6O60337 910 aa17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 GDF11O95390 407 aa17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 CYP3A7P24462 503 aa17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 TSR1Q2NL82 804 aaKnown RBP17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 GPR161Q8N6U8 529 aaKnown RBP17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 GLIS3Q8NEA6 775 aa17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 CRYGNQ8WXF5 182 aa17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 MBOAT7Q96N66 472 aa17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 P2RX7Q99572 595 aaKnown RBP17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 TRIM34Q9BYJ4 488 aa17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 TDRD3Q9H7E2 651 aaKnown RBP17.92■□□□□ 0.46
SCNN1A-221ENST00000543768 CTAGE9A4FU28 777 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 HOXA7P31268 230 aaPredicted RBP17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 JAG1P78504 1218 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 ZBED6P86452 979 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 ABCB5Q2M3G0 1257 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 FIGNQ5HY92 759 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 ATRNL1Q5VV63 1379 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 ZRANB2O95218 330 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 LRRC63Q05C16 580 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 KIF4BQ2VIQ3 1234 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 TEX35Q5T0J7 233 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 GMCL1P1Q8NEA9 526 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 UIMC1Q96RL1 719 aa17.91■□□□□ 0.46
SCNN1A-221ENST00000543768 HERVK_113P62684 666 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 COASYQ13057 564 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 TUBB2AQ13885 445 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 LRRC41Q15345 812 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 VWA3BQ502W6 1294 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 SRGAP1Q7Z6B7 1085 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 RABGGTAQ92696 567 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 CNKSR1Q969H4 720 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 GMCL1Q96IK5 515 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 TUBB2BQ9BVA1 445 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 NT5C3AQ9H0P0 336 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 TMEM51Q9NW97 253 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 ARGLU1Q9NWB6 273 aaPredicted RBP17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 TRIM10Q9UDY6 481 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 FHOD1Q9Y613 1164 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 ABCB11O95342 1321 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 KDM3AQ9Y4C1 1321 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 A0A1W2PQJ5 194 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 NDUFB10O96000 172 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 SNAP25P60880 206 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 RRP1BQ14684 758 aaKnown RBP17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 LRRC55Q6ZSA7 311 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 KRT222Q8N1A0 295 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 GOLGA1Q92805 767 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 PRMT6Q96LA8 375 aaPredicted RBP17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 NAPGQ99747 312 aaPredicted RBP17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 NDST4Q9H3R1 872 aa17.9■□□□□ 0.46
SCNN1A-221ENST00000543768 E9PMD0 336 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 ENTPD3O75355 529 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 AP3B2Q13367 1082 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 BMS1Q14692 1282 aaKnown RBP17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 FKBP15Q5T1M5 1219 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 FOXR2Q6PJQ5 311 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 MOXD1Q6UVY6 613 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 AMNQ9BXJ7 453 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 HAUS4Q9H6D7 363 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 KIAA1024Q9UPX6 916 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 SIK3Q9Y2K2 1263 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 GOLGB1Q14789 3259 aaKnown RBP17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 YDJCA8MPS7 323 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 PCMTD1Q96MG8 357 aaPredicted RBP17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 GUCA1BQ9UMX6 200 aa17.89■□□□□ 0.45
SCNN1A-221ENST00000543768 POTEB3A0JP26 581 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 POTECB2RU33 542 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 FGFR1OPO95684 399 aaKnown RBP17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 GH2P01242 217 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 CHMP4BP1P59074 171 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 ARHGAP4P98171 946 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms