RNA–Protein interactions for RNA: ENST00000543729.5

TRIM46-209, Transcript of tripartite motif containing 46, humanhuman

TSL 5 BASIC

Gene TRIM46, Length 1,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-209ENST00000543729 SMCHD1A6NHR9 2005 aa18.27■□□□□ 0.51
TRIM46-209ENST00000543729 PTPDC1A2A3K4 754 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 ATP2A1O14983 1001 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 DEXIO95424 95 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 FUT2Q10981 343 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 LEO1Q8WVC0 666 aaPredicted RBP18.26■□□□□ 0.51
TRIM46-209ENST00000543729 MTMR8Q96EF0 704 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 XPNPEP3Q9NQH7 507 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 CCDC39Q9UFE4 941 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
TRIM46-209ENST00000543729 STK36Q9NRP7 1315 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 hCG_1642624A0A1W2PR95 340 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 PPFIA3O75145 1194 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 ADCYAP1R1P41586 468 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 SNX17Q15036 470 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 SLC35G1Q2M3R5 365 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 USH1GQ495M9 461 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 HEATR3Q7Z4Q2 680 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 DDX11Q96FC9 970 aa18.26■□□□□ 0.51
TRIM46-209ENST00000543729 ORC3Q9UBD5 711 aaPredicted RBP18.26■□□□□ 0.51
TRIM46-209ENST00000543729 GOLGA6L4A6NEF3 574 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 hCG_1984214I3L0E3 225 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 CTDNEP1O95476 244 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 ALAS1P13196 640 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 AKR1A1P14550 325 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 TKFCQ3LXA3 575 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 C1orf53Q5VUE5 145 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 RNF180Q86T96 592 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 FERMT3Q86UX7 667 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 DEFB123Q8N688 67 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 ZNF713Q8N859 430 aaPredicted RBP18.25■□□□□ 0.51
TRIM46-209ENST00000543729 PHF24Q9UPV7 400 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 PCDHA1Q9Y5I3 950 aa18.25■□□□□ 0.51
TRIM46-209ENST00000543729 ABCB11O95342 1321 aa18.24■□□□□ 0.51
TRIM46-209ENST00000543729 CCDC192P0DO97 292 aa18.24■□□□□ 0.51
TRIM46-209ENST00000543729 SCG2P13521 617 aa18.24■□□□□ 0.51
TRIM46-209ENST00000543729 XBP1P17861 261 aa18.24■□□□□ 0.51
TRIM46-209ENST00000543729 MSNP26038 577 aaKnown RBP18.24■□□□□ 0.51
TRIM46-209ENST00000543729 PFKFB3Q16875 520 aaPredicted RBP18.24■□□□□ 0.51
TRIM46-209ENST00000543729 RBM43Q6ZSC3 357 aaKnown RBP18.24■□□□□ 0.51
TRIM46-209ENST00000543729 AGBL1Q96MI9 1066 aa18.24■□□□□ 0.51
TRIM46-209ENST00000543729 FBXO40Q9UH90 709 aa18.24■□□□□ 0.51
TRIM46-209ENST00000543729 ZNF536O15090 1300 aa18.24■□□□□ 0.51
TRIM46-209ENST00000543729 SYNGAP1Q96PV0 1343 aa18.24■□□□□ 0.51
TRIM46-209ENST00000543729 ZNF865P0CJ78 1059 aaPredicted RBP18.23■□□□□ 0.51
TRIM46-209ENST00000543729 TAL1P17542 331 aaPredicted RBP18.23■□□□□ 0.51
TRIM46-209ENST00000543729 TRIM60Q495X7 471 aa18.23■□□□□ 0.51
TRIM46-209ENST00000543729 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRIM46-209ENST00000543729 CCDC12Q8WUD4 166 aaPredicted RBP18.23■□□□□ 0.51
TRIM46-209ENST00000543729 FERMT2Q96AC1 680 aa18.23■□□□□ 0.51
TRIM46-209ENST00000543729 NUP62CLQ9H1M0 184 aa18.23■□□□□ 0.51
TRIM46-209ENST00000543729 HOMER2Q9NSB8 354 aa18.23■□□□□ 0.51
TRIM46-209ENST00000543729 MRPL11Q9Y3B7 192 aaKnown RBP18.23■□□□□ 0.51
TRIM46-209ENST00000543729 RIPK3Q9Y572 518 aa18.23■□□□□ 0.51
TRIM46-209ENST00000543729 LTBP2Q14767 1821 aa18.23■□□□□ 0.51
TRIM46-209ENST00000543729 DNAJC25-GNG10A0A024R161 153 aa18.23■□□□□ 0.51
TRIM46-209ENST00000543729 ZNF467Q7Z7K2 595 aaPredicted RBP18.23■□□□□ 0.51
TRIM46-209ENST00000543729 ZNF396Q96N95 335 aaPredicted RBP18.23■□□□□ 0.51
TRIM46-209ENST00000543729 TRERF1Q96PN7 1200 aa18.23■□□□□ 0.51
TRIM46-209ENST00000543729 PRDM5Q9NQX1 630 aaPredicted RBP18.23■□□□□ 0.51
TRIM46-209ENST00000543729 CAVIN2O95810 425 aa18.22■□□□□ 0.51
TRIM46-209ENST00000543729 PGK1P00558 417 aa18.22■□□□□ 0.51
TRIM46-209ENST00000543729 NAPAP54920 295 aa18.22■□□□□ 0.51
TRIM46-209ENST00000543729 TRIM29Q14134 588 aa18.22■□□□□ 0.51
TRIM46-209ENST00000543729 MAMDC4Q6UXC1 1216 aa18.22■□□□□ 0.51
TRIM46-209ENST00000543729 RNF214Q8ND24 703 aa18.22■□□□□ 0.51
TRIM46-209ENST00000543729 CHST13Q8NET6 341 aa18.22■□□□□ 0.51
TRIM46-209ENST00000543729 CCDC148Q8NFR7 591 aa18.22■□□□□ 0.51
TRIM46-209ENST00000543729 GPKOWQ92917 476 aaPredicted RBP eCLIP18.22■□□□□ 0.51
TRIM46-209ENST00000543729 RNF146Q9NTX7 359 aa18.22■□□□□ 0.51
TRIM46-209ENST00000543729 PPP1R18Q6NYC8 613 aa18.21■□□□□ 0.51
TRIM46-209ENST00000543729 ANKRD35Q8N283 1001 aa18.21■□□□□ 0.51
TRIM46-209ENST00000543729 ALG1Q9BT22 464 aa18.21■□□□□ 0.51
TRIM46-209ENST00000543729 ACAD9Q9H845 621 aa18.21■□□□□ 0.51
TRIM46-209ENST00000543729 PDLIM7Q9NR12 457 aa18.21■□□□□ 0.51
TRIM46-209ENST00000543729 RCOR1Q9UKL0 485 aa18.21■□□□□ 0.51
TRIM46-209ENST00000543729 FAM184BQ9ULE4 1060 aa18.21■□□□□ 0.51
TRIM46-209ENST00000543729 ZNF500O60304 480 aaPredicted RBP18.2■□□□□ 0.5
TRIM46-209ENST00000543729 PPP1R11O60927 126 aaPredicted RBP18.2■□□□□ 0.5
TRIM46-209ENST00000543729 WWC2Q6AWC2 1192 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 Q7L0L9 218 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 MCF2L2Q86YR7 1114 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 TSEN34Q9BSV6 310 aaKnown RBP18.2■□□□□ 0.5
TRIM46-209ENST00000543729 BARHL2Q9NY43 387 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 MYH6P13533 1939 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 SNAI1O95863 264 aaPredicted RBP18.2■□□□□ 0.5
TRIM46-209ENST00000543729 TLE2Q04725 743 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 PKN1Q16512 942 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 SLC17A8Q8NDX2 589 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 CLSTN2Q9H4D0 955 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 SH3GLB2Q9NR46 395 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 MTMR10Q9NXD2 777 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 ZHX1Q9UKY1 873 aaPredicted RBP18.2■□□□□ 0.5
TRIM46-209ENST00000543729 ZKSCAN5Q9Y2L8 839 aa18.2■□□□□ 0.5
TRIM46-209ENST00000543729 MYH15Q9Y2K3 1946 aa18.19■□□□□ 0.5
TRIM46-209ENST00000543729 CTAGE5O15320 804 aa18.19■□□□□ 0.5
TRIM46-209ENST00000543729 DTNBO60941 627 aa18.19■□□□□ 0.5
TRIM46-209ENST00000543729 ADAMTS4O75173 837 aa18.19■□□□□ 0.5
TRIM46-209ENST00000543729 FAM109BQ6ICB4 259 aaPredicted RBP18.19■□□□□ 0.5
TRIM46-209ENST00000543729 CUL5Q93034 780 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms