RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 CBX1P83916 185 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 USP17L24Q0WX57 530 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 USP17L6PQ6QN14 398 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 DYMQ7RTS9 669 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 OR8K1Q8NGG5 319 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 LRRC27Q9C0I9 530 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 LUC7L2Q9Y383 392 aaKnown RBP15.53■□□□□ 0.08
MSH2-206ENST00000543555 MARCH6O60337 910 aa15.52■□□□□ 0.08
MSH2-206ENST00000543555 ARHGAP29Q52LW3 1261 aa15.52■□□□□ 0.08
MSH2-206ENST00000543555 DNAJC7Q99615 494 aa15.52■□□□□ 0.08
MSH2-206ENST00000543555 PCDHA12Q9UN75 941 aa15.52■□□□□ 0.08
MSH2-206ENST00000543555 YDJCA8MPS7 323 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 GDF11O95390 407 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 MTIF2P46199 727 aaKnown RBP15.52■□□□□ 0.07
MSH2-206ENST00000543555 ECM1Q16610 540 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 ABCB5Q2M3G0 1257 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 GJA10Q969M2 543 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 CHP1Q99653 195 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 TDRD3Q9H7E2 651 aaKnown RBP15.52■□□□□ 0.07
MSH2-206ENST00000543555 DDX41Q9UJV9 622 aaKnown RBP15.52■□□□□ 0.07
MSH2-206ENST00000543555 ATRNL1Q5VV63 1379 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 F5H6K3 240 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 KLRC3Q07444 240 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 GMCL1P1Q8NEA9 526 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 DDX12PQ92771 950 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 SYT17Q9BSW7 474 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 ANO3Q9BYT9 981 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 OGFRQ9NZT2 677 aa15.52■□□□□ 0.07
MSH2-206ENST00000543555 SCAF8Q9UPN6 1271 aaKnown RBP15.52■□□□□ 0.07
MSH2-206ENST00000543555 ENTPD3O75355 529 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 USP11P51784 963 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 PPP2R3AQ06190 1150 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 TBC1D8BQ0IIM8 1120 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 MIIPQ5JXC2 388 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 GUF1Q8N442 669 aaKnown RBP15.51■□□□□ 0.07
MSH2-206ENST00000543555 TTYH3Q9C0H2 523 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 MYH7BA7E2Y1 1941 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 IDEP14735 1019 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 HOXA7P31268 230 aaPredicted RBP15.51■□□□□ 0.07
MSH2-206ENST00000543555 EHHADHQ08426 723 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 HYIQ5T013 277 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 UBE2Q2Q8WVN8 375 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 GMCL1Q96IK5 515 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 SLF1Q9BQI6 1058 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 NOC4LQ9BVI4 516 aaKnown RBP15.51■□□□□ 0.07
MSH2-206ENST00000543555 NUP58Q9BVL2 599 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 KDM3AQ9Y4C1 1321 aa15.51■□□□□ 0.07
MSH2-206ENST00000543555 NDUFB10O96000 172 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 ZNF569Q5MCW4 686 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 RETREG2Q8NC44 543 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 KCNMB3Q9NPA1 279 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 CD2APQ9Y5K6 639 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 EPN1Q9Y6I3 576 aaPredicted RBP15.5■□□□□ 0.07
MSH2-206ENST00000543555 CYP3A7-CYP3A51PA0A087WV96 503 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 NFKBIEO00221 500 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 MEIS2O14770 477 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 NDUFA10O95299 355 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 CYP3A7P24462 503 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 ARHGAP25P42331 645 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 PRELPP51888 382 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 PSMD2Q13200 908 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 AP3B2Q13367 1082 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 TSR1Q2NL82 804 aaKnown RBP15.5■□□□□ 0.07
MSH2-206ENST00000543555 WDR59Q6PJI9 974 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 ARHGAP27Q6ZUM4 889 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 MBOAT7Q96N66 472 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 AMNQ9BXJ7 453 aa15.5■□□□□ 0.07
MSH2-206ENST00000543555 ARFGEF1Q9Y6D6 1849 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 RASSF10A6NK89 507 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 CC2D2BQ6DHV5 1058 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 PRMT6Q96LA8 375 aaPredicted RBP15.49■□□□□ 0.07
MSH2-206ENST00000543555 NT5C3AQ9H0P0 336 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 COL2A1P02458 1487 aaPredicted RBP15.49■□□□□ 0.07
MSH2-206ENST00000543555 TRIM21P19474 475 aaKnown RBP15.49■□□□□ 0.07
MSH2-206ENST00000543555 JAG1P78504 1218 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 MOXD1Q6UVY6 613 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 SUPT20HQ8NEM7 779 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 DNAJC19Q96DA6 116 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 ERGIC2Q96RQ1 377 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 REXO2Q9Y3B8 237 aaKnown RBP15.49■□□□□ 0.07
MSH2-206ENST00000543555 NKRFO15226 690 aaKnown RBP eCLIP15.49■□□□□ 0.07
MSH2-206ENST00000543555 ABL1P00519 1130 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 GH2P01242 217 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 KLK7P49862 253 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 LRRC63Q05C16 580 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 MEA1Q16626 185 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 RBM26Q5T8P6 1007 aaKnown RBP15.49■□□□□ 0.07
MSH2-206ENST00000543555 CRYGNQ8WXF5 182 aa15.49■□□□□ 0.07
MSH2-206ENST00000543555 FGFR1OPO95684 399 aaKnown RBP15.48■□□□□ 0.07
MSH2-206ENST00000543555 SNAP25P60880 206 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 FKBP15Q5T1M5 1219 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 SYDE2Q5VT97 1194 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 MCTP2Q6DN12 878 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 SLC35F6Q8N357 371 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 AGPAT5Q9NUQ2 364 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 MYO1AQ9UBC5 1043 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 SHTN1A0MZ66 631 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 SLC26A4O43511 780 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 CLCN6P51797 869 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 FIGNQ5HY92 759 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms