RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 TSGA10IPQ3SY00 556 aa15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 CCDC62Q6P9F0 684 aa15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 GDAP1Q8TB36 358 aa15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 ZNF609O15014 1411 aa15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 LRRC53A6NM62 1247 aa15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 SCNN1DP51172 638 aa15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 APBA1Q02410 837 aa15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 CFAP157Q5JU67 520 aa15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 FHOD1Q9Y613 1164 aa15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 MROH7-TTC4A0A0A0MT08 1334 aa15.11■□□□□ 0.01
RPS6KC1-206ENST00000543354 GNA14O95837 355 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 DLATP10515 647 aaKnown RBP15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 BSPRYQ5W0U4 402 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 SEPT14Q6ZU15 432 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 SDCCAG8Q86SQ7 713 aaPredicted RBP15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 IQCDQ96DY2 449 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 TSNARE1Q96NA8 513 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 C8orf37Q96NL8 207 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 LZTS2Q9BRK4 669 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 SNX24Q9Y343 169 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 RNF17Q9BXT8 1623 aaKnown RBP15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 PRPF3O43395 683 aaKnown RBP15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 KRT14P02533 472 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 AGPAT5Q9NUQ2 364 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 COL4A3BPQ9Y5P4 624 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 ABCA6Q8N139 1617 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 FAM114A2Q9NRY5 505 aa15.1■□□□□ 0.01
RPS6KC1-206ENST00000543354 POTEMA6NI47 508 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 SFI1A8K8P3 1242 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 CIB2O75838 187 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 SUN1O94901 812 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 ACSL3O95573 720 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 TNNI1P19237 187 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 ALS2CLQ60I27 953 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 NSMFQ6X4W1 530 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 FMO2Q99518 471 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 GAS7O60861 476 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 NUGGCQ68CJ6 796 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 ENAHQ8N8S7 591 aaPredicted RBP15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 SPATA4Q8NEY3 305 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 ATP8A2Q9NTI2 1148 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 SORBS3O60504 671 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 FGGP02679 453 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 TRAF1Q13077 416 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 RASA3Q14644 834 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 UBE2SQ16763 222 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 CROCCP2Q86T23 111 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 REXO1L1PQ8IX06 675 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 MS4A14Q96JA4 679 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 OSBPL9Q96SU4 736 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 MAK16Q9BXY0 300 aaKnown RBP15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 GGA1Q9UJY5 639 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 MLH3Q9UHC1 1453 aa15.09■□□□□ 0.01
RPS6KC1-206ENST00000543354 MAGOHP61326 146 aaKnown RBP15.08■□□□□ 0.01
RPS6KC1-206ENST00000543354 LRCH2Q5VUJ6 765 aa15.08■□□□□ 0.01
RPS6KC1-206ENST00000543354 SPICE1Q8N0Z3 855 aa15.08■□□□□ 0.01
RPS6KC1-206ENST00000543354 RAB3IL1Q8TBN0 382 aa15.08■□□□□ 0.01
RPS6KC1-206ENST00000543354 PNKPQ96T60 521 aa15.08■□□□□ 0.01
RPS6KC1-206ENST00000543354 GGT7Q9UJ14 662 aa15.08■□□□□ 0.01
RPS6KC1-206ENST00000543354 ZNF148Q9UQR1 794 aa15.08■□□□□ 0.01
RPS6KC1-206ENST00000543354 H0Y3Z8 333 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 SMTNP53814 917 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 HDLBPQ00341 1268 aaKnown RBP15.08■□□□□ 0
RPS6KC1-206ENST00000543354 KCTD1Q719H9 257 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 SCYL3Q8IZE3 742 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 SLC44A5Q8NCS7 719 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 THAP9Q9H5L6 903 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 L2HGDHQ9H9P8 463 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 HDAC9Q9UKV0 1011 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 ABCC12Q96J65 1359 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 WDR91A4D1P6 747 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 FCER1AP12319 257 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 ODR4Q5SWX8 454 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 CASC4Q6P4E1 433 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 ZNF449Q6P9G9 518 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 CCDC110Q8TBZ0 833 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 EMILIN3Q9NT22 766 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 GINS2Q9Y248 185 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 MAP3K4Q9Y6R4 1608 aa15.08■□□□□ 0
RPS6KC1-206ENST00000543354 ARHGAP42A6NI28 874 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 RASIP1Q5U651 963 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 LBHD1Q9BQE6 289 aaPredicted RBP15.07■□□□□ 0
RPS6KC1-206ENST00000543354 PCIF1Q9H4Z3 704 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 CFAP61Q8NHU2 1237 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 FBXO2Q9UK22 296 aaPredicted RBP15.07■□□□□ 0
RPS6KC1-206ENST00000543354 KIF1BO60333 1816 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 PRPF6O94906 941 aaKnown RBP15.07■□□□□ 0
RPS6KC1-206ENST00000543354 H2AFXP16104 143 aaPredicted RBP15.07■□□□□ 0
RPS6KC1-206ENST00000543354 BTDP43251 543 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 SEC24CP53992 1094 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 ZNF211Q13398 564 aaPredicted RBP15.07■□□□□ 0
RPS6KC1-206ENST00000543354 TXNRD1Q16881 649 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 USPL1Q5W0Q7 1092 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 FAM47EQ6ZV65 393 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 FUT8Q9BYC5 575 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 USP40Q9NVE5 1235 aa15.07■□□□□ 0
RPS6KC1-206ENST00000543354 ADD3Q9UEY8 706 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms