RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 SEPT2Q15019 361 aa20.73■□□□□ 0.91
COPS7A-215ENST00000543155 MAN2A1Q16706 1144 aa20.73■□□□□ 0.91
COPS7A-215ENST00000543155 TRAPPC11Q7Z392 1133 aa20.73■□□□□ 0.91
COPS7A-215ENST00000543155 DDX12PQ92771 950 aa20.73■□□□□ 0.91
COPS7A-215ENST00000543155 HAS1Q92839 578 aa20.73■□□□□ 0.91
COPS7A-215ENST00000543155 UBXN6Q9BZV1 441 aa20.73■□□□□ 0.91
COPS7A-215ENST00000543155 KDM3AQ9Y4C1 1321 aa20.73■□□□□ 0.91
COPS7A-215ENST00000543155 IDEP14735 1019 aa20.72■□□□□ 0.91
COPS7A-215ENST00000543155 LONRF2Q1L5Z9 754 aa20.72■□□□□ 0.91
COPS7A-215ENST00000543155 KCNK18Q7Z418 384 aa20.72■□□□□ 0.91
COPS7A-215ENST00000543155 TSG101Q99816 390 aa20.72■□□□□ 0.91
COPS7A-215ENST00000543155 FUT8Q9BYC5 575 aa20.72■□□□□ 0.91
COPS7A-215ENST00000543155 TMX4Q9H1E5 349 aaPredicted RBP20.72■□□□□ 0.91
COPS7A-215ENST00000543155 NDST4Q9H3R1 872 aa20.72■□□□□ 0.91
COPS7A-215ENST00000543155 ZHX1Q9UKY1 873 aaPredicted RBP20.72■□□□□ 0.91
COPS7A-215ENST00000543155 ATF5Q9Y2D1 282 aaPredicted RBP20.72■□□□□ 0.91
COPS7A-215ENST00000543155 MARCH6O60337 910 aa20.72■□□□□ 0.91
COPS7A-215ENST00000543155 CRKP46108 304 aa20.72■□□□□ 0.91
COPS7A-215ENST00000543155 NLGN1Q8N2Q7 840 aa20.72■□□□□ 0.91
COPS7A-215ENST00000543155 NFIAQ12857 509 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 HYIQ5T013 277 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 SIK3Q9Y2K2 1263 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 NKRFO15226 690 aaKnown RBP eCLIP20.71■□□□□ 0.91
COPS7A-215ENST00000543155 ERLIN1O75477 346 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 TFRCP02786 760 aaKnown RBP20.71■□□□□ 0.91
COPS7A-215ENST00000543155 HNRNPH3P31942 346 aaKnown RBP20.71■□□□□ 0.91
COPS7A-215ENST00000543155 PDE6BP35913 854 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 KRT27Q7Z3Y8 459 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 DCAF4Q8WV16 495 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 ZDHHC15Q96MV8 337 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 PNKPQ96T60 521 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 NT5C3AQ9H0P0 336 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 PCDHA12Q9UN75 941 aa20.71■□□□□ 0.91
COPS7A-215ENST00000543155 SLC26A4O43511 780 aa20.7■□□□□ 0.9
COPS7A-215ENST00000543155 TUBBP07437 444 aa20.7■□□□□ 0.9
COPS7A-215ENST00000543155 ECM1Q16610 540 aa20.7■□□□□ 0.9
COPS7A-215ENST00000543155 PROM2Q8N271 834 aa20.7■□□□□ 0.9
COPS7A-215ENST00000543155 DHX36Q9H2U1 1008 aaKnown RBP20.7■□□□□ 0.9
COPS7A-215ENST00000543155 COASYQ13057 564 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 PAPD7Q5XG87 772 aaKnown RBP20.69■□□□□ 0.9
COPS7A-215ENST00000543155 NCAPH2Q6IBW4 605 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 LRRC55Q6ZSA7 311 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 CCDC84Q86UT8 332 aaPredicted RBP20.69■□□□□ 0.9
COPS7A-215ENST00000543155 MKL1Q969V6 931 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 DNAJC19Q96DA6 116 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 TSGA10Q9BZW7 698 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 DNAJC18Q9H819 358 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 VAV2P52735 878 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 QRICH1Q2TAL8 776 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 ZFPM1Q8IX07 1006 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 MYOCDQ8IZQ8 938 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 MASTLQ96GX5 879 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 QTRT2Q9H974 415 aaKnown RBP20.69■□□□□ 0.9
COPS7A-215ENST00000543155 NYAP2Q9P242 653 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 TFR2Q9UP52 801 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 PLAGL2Q9UPG8 496 aa20.69■□□□□ 0.9
COPS7A-215ENST00000543155 ZNF646O15015 1829 aaPredicted RBP20.68■□□□□ 0.9
COPS7A-215ENST00000543155 ATP1A1P05023 1023 aaKnown RBP20.68■□□□□ 0.9
COPS7A-215ENST00000543155 SMC1AQ14683 1233 aaKnown RBP20.68■□□□□ 0.9
COPS7A-215ENST00000543155 PODNQ7Z5L7 613 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 CCDC42Q96M95 316 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 PURBQ96QR8 312 aaKnown RBP20.68■□□□□ 0.9
COPS7A-215ENST00000543155 GBP3Q9H0R5 595 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 BMP2KQ9NSY1 1161 aaPredicted RBP20.68■□□□□ 0.9
COPS7A-215ENST00000543155 SAR1BQ9Y6B6 198 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 MAP2K7O14733 419 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 RHOXF2BP0C7M4 288 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 EEF2P13639 858 aaKnown RBP20.68■□□□□ 0.9
COPS7A-215ENST00000543155 USP11P51784 963 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 SPA17Q15506 151 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 BEND6Q5SZJ8 279 aaPredicted RBP20.68■□□□□ 0.9
COPS7A-215ENST00000543155 RHOXF2Q9BQY4 288 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 MRIQ9BWK5 157 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 LACRTQ9GZZ8 138 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 PANK4Q9NVE7 773 aa20.68■□□□□ 0.9
COPS7A-215ENST00000543155 ANO9A1A5B4 782 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 RCCD1A6NED2 376 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 ENC1O14682 589 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 OAS2P29728 719 aaKnown RBP20.67■□□□□ 0.9
COPS7A-215ENST00000543155 SLC1A4P43007 532 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 LRRC41Q15345 812 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 CDC37Q16543 378 aaPredicted RBP20.67■□□□□ 0.9
COPS7A-215ENST00000543155 GJA10Q969M2 543 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 PKNOX2Q96KN3 472 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 ANO3Q9BYT9 981 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 KANSL2Q9H9L4 492 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 FAM207AQ9NSI2 230 aaPredicted RBP20.67■□□□□ 0.9
COPS7A-215ENST00000543155 HDAC6Q9UBN7 1215 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 PCDHA1Q9Y5I3 950 aa20.67■□□□□ 0.9
COPS7A-215ENST00000543155 FKBP1AP62942 108 aaKnown RBP20.66■□□□□ 0.9
COPS7A-215ENST00000543155 CKAP4Q07065 602 aaKnown RBP20.66■□□□□ 0.9
COPS7A-215ENST00000543155 KIF5AQ12840 1032 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 CERKLQ49MI3 558 aaPredicted RBP20.66■□□□□ 0.9
COPS7A-215ENST00000543155 ZCWPW2Q504Y3 356 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 FAM26FQ5R3K3 315 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 SLFN13Q68D06 897 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 NOA1Q8NC60 698 aaKnown RBP20.66■□□□□ 0.9
COPS7A-215ENST00000543155 DBNDD1Q9H9R9 158 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 KCNMB3Q9NPA1 279 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 CYP3A7-CYP3A51PA0A087WV96 503 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms